Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0317 ATGAGGAAGGTTCTTGGGGAGGGACTCTTTGTTGTAGTGATTTTGGTAATAATAGTCTCAGTCACAGTGAGTGTTGTAGAAGCTCAATCAAAGTCTTTTCTCATAGATTGTGGTTCAAATTCTTCTGTAAATGTTGATGGTAGAAAATGGGTTGGGGACATGGCCCTTAATAATAATGTCACACTCAGTTCAACTGGTTTTGATGTTTTCACTTCTACATTAAGTGGAAATTCAATATATGATCCTCTTTACAAAACAGCCAGAATCTTCACAAGTTATTTGAATTACACAATCAAAGGAGTTAAGGGAAACTATTTTGTTAGGTTACATTTCTGCCCCTTTGTGAATGAGGACTATAATCTGAATAAGTCCTCCTTTGGTGTTGTGGCCAATGGTATGAAAGTATTATCGGAGTTCAATGTTCCATTCGAGATATCTGACGAGAATATGGAATTGCAGAAGTCTGGAAAGAATTCTAGTTCATTTTTCTTGGTTAAAGAGTATATTATGACTATCAATGTGGATACACTTGTGATTGAGTTTGTTCCAACTGGAAGCTCATTTGGTTTCATCAATGCCATTGAGATTGTTCCGTTTGTGGACGAGCTTTTTCCTGGCTCAGTTGGTAAAGTTGGTGGTGGAAACTTGAATTTGACTGGACGTTCGATGGAGACTATGTATAGGTTGAATGTTGGTGGTTCTGAGATTCAACCCAATCAGGATCCTGATCTTTGGAGAACTTGGGAAGTGGATTCCGGGCATATGATCACAGAAAATGCTGGCTCTGGACTTAAGAACAGTTCTAATATTACATACGCTTCCGTGAATGATACTTCAGTGGCTCCTCTCCTTGTGTATGAAACTGCAAGGGCAATGTCTAACAATGAAGTCTTGGAGAAGAGATTTAACATGTCATGGAAATTTGAAGTGGATCCCGATTTTGATTATTTGGTCCGGTTGCATTTCTGTGAGCTGCTTTACGATAAGGCAAACGAGAGAATTTTCAGGATCTACATAAATAACAGGACAGCTGCAGATAATTTTGATGTTTACGTACGAGCAAGAGGGATGAATAAAGCATACCACCAGGATTATTTTGATTCCTTGTCGTCAAAGATTGACACACTTTGGGTTCAACTCGGTCCTGACACCGCTGCTGGTGCTGCAGGGACTGATGCTCTCTTGAATGGACTAGAGATTTTCAAGCTTAGCAAAAATGGGAATCTTGCCTCTGTACAGAGATATGACTCAGCCGACAATGCAACAAGCAAATCAAAGGCAAAAGTTCTTTGGGTCGGAATTGGAGCAGCTGTAGCTGCTGCAGCTGTACTTGTTTGTGTGATTCTTCTTGTTTTATGTTTCTGCAAAAGCCGAAGGAAAACATCAACCGATACCAAAAACAACTCTCCAGGATGGCGACCATTGTTCCTGTACGGGGCTGCTCTTAACAGCACCGTGGGTGCCAAGGAATCAGCAGGAACTCAAAAGGCATATGGGTCTATGGCCTCAACCAGGGTTGGCAAAAAGTTTACACTGGCAGAAATTAATGCCGCTACTAAAAACTTCGATGAGAGTTTGATAATTGGAGTTGGAGGCTTTGGTAAGGTGTATAAGGGAGAGATCGATGATGGTGTCCTCGCTGCAATCAAGCGAGCCAACCCGCAGTCTGAGCAAGGTCTGACTGAATTCGAGACAGAAATTGATATGCTCTCCAAACTCAGGCATAGGCATCTGGTGTCCTTGATTGGTTTCTGTGAAGAGAAAAATGAAATGATTTTGGTTTATGAGTATATGGCAAATGGAACTCTTAGAAGTCATCTATTCGGCAGCGATCTCCCCCCATTAAGTTGGAAGCAGCGTCTAGAAGCGTGCATCGGTGCTGCAAGGGGACTTCACTACCTTCATACAGGAGCGGATCGTGGAATAATACACAGGGATGTCAAGACAACCAATATATTGCTAGATGAGAATTTTGTAGCCAAAATGGCTGATTTTGGGTTGTCAAAAGATGGACCTGCTTTGGACCATACTCATGTTAGTACAGCTGTGAAAGGAAGTTTCGGCTATCTAGACCCCGAATACTTTCGACGACAACAATTGACAGAGAAATCAGATGTTTACTCTTTTGGAGTTGTGTTGTTTGAATGTGCTTGTGCAAGAGCTGTTATAAATCCTACCTTGCCTAAGGATCAAATCAACCTTGCAGAATGGGCAATGAGATGGCAAAAACAAAAATCACTTGAGACAATTATAGACCCTCATCTTAGAGAAAACTATTGCCCTGAATCCTTCACCAAGTTTGGGGAGATAGCTGAAAAGTGTCTCGCCGATGACGGGAAGAGTCGGCCAACGATGGGCGAGGTGTTATGGCACTTGGAGTATGTCTTGCAGCTACATGAATCTTGGCTAAATATGCACAACTCAGAAACTTCTTTCACAAGTAATCATGTTTTGAAAGTTGAAGGATTAGAAGTTTTGCATGGGCCTTCAAGTGAAGATGAAGGAAATGCCTTAAATCTCAAAGAGTAA 2529 0.4148 MRKVLGEGLFVVVILVIIVSVTVSVVEAQSKSFLIDCGSNSSVNVDGRKWVGDMALNNNVTLSSTGFDVFTSTLSGNSIYDPLYKTARIFTSYLNYTIKGVKGNYFVRLHFCPFVNEDYNLNKSSFGVVANGMKVLSEFNVPFEISDENMELQKSGKNSSSFFLVKEYIMTINVDTLVIEFVPTGSSFGFINAIEIVPFVDELFPGSVGKVGGGNLNLTGRSMETMYRLNVGGSEIQPNQDPDLWRTWEVDSGHMITENAGSGLKNSSNITYASVNDTSVAPLLVYETARAMSNNEVLEKRFNMSWKFEVDPDFDYLVRLHFCELLYDKANERIFRIYINNRTAADNFDVYVRARGMNKAYHQDYFDSLSSKIDTLWVQLGPDTAAGAAGTDALLNGLEIFKLSKNGNLASVQRYDSADNATSKSKAKVLWVGIGAAVAAAAVLVCVILLVLCFCKSRRKTSTDTKNNSPGWRPLFLYGAALNSTVGAKESAGTQKAYGSMASTRVGKKFTLAEINAATKNFDESLIIGVGGFGKVYKGEIDDGVLAAIKRANPQSEQGLTEFETEIDMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLSWKQRLEACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMADFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFECACARAVINPTLPKDQINLAEWAMRWQKQKSLETIIDPHLRENYCPESFTKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHESWLNMHNSETSFTSNHVLKVEGLEVLHGPSSEDEGNALNLKE 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0317 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lal11g0317 842 SUPERFAMILY Protein kinase-like (PK-like) 500 794 IPR011009 -
Lal11g0317 842 PANTHER OS07G0166700 PROTEIN 22 818 IPR045272 GO:0004714|GO:0006468
Lal11g0317 842 SMART serkin_6 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0317 842 ProSiteProfiles Protein kinase domain profile. 522 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0317 842 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Lal11g0317 842 Gene3D Transferase(Phosphotransferase) domain 1 598 818 - -
Lal11g0317 842 Gene3D Phosphorylase Kinase; domain 1 483 597 - -
Lal11g0317 842 Gene3D - 29 199 - -
Lal11g0317 842 Gene3D - 221 405 - -
Lal11g0317 842 Pfam Protein tyrosine and serine/threonine kinase 528 790 IPR001245 GO:0004672|GO:0006468
Lal11g0317 842 Pfam Malectin-like domain 35 402 IPR024788 -
Lal11g0317 842 PANTHER OSJNBA0058K23.13 PROTEIN 22 818 - -
Lal11g0317 842 CDD STKc_IRAK 528 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0317 Lal-Chr11 2288812 2291340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0317 1 819 Receptor kinase-like Gene Family AT1G30570 65.249 0.0 1118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal11g0317 Malectin_like 2.4e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0317 - - gmx:100791403 1329.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0317 11 2288812 2291340 Lal11g0317 11 2288812 2291340 ECH