Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0316 ATGAAGCTCTTTAGCCTTTTAGTGTTATCATTGTCTTTCTTCTCAGTTATGGGGCAGCTACCTTCACAGGACATTTTAGCATTGCTGGAATTTAAGAAAGGCATCAGGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAGGAATCCATTGACTTTGATGGATGCCCATCTTCATGGAATGGAGTTCTATGTAACGGCGGTAACGTTGCGGGTGTTGTTCTTGATAACCTAGGTCTCTCTACTGATGCTGACTTGAGTGTTTTTTCAAACCTCACAAAGCTTGTGAAGTTATCGATGTCCAACAATTTCATATCAGGAAATCTACCTGACAACATTGGTAATTTCAAAAGCCTTCAATTCCTGGATATCTCCAATAACCTCTTTTCTTCATCCTTACCGTCAGGAATTGGTAACTTAGGTAGTTTGCAAAATCTGTCATTGGCTGGAAATAACTTCTCTGGTCTAATTCCCGAAACTATTTCAAAAATGGCTTCTATCCAGTCTTTTGACTTGAGCCGCAATTCCTTTTCCGGAGCAATGCCAGCATCATTGACTAAGCTGAAAAGCTTGGTATCTCTTAACTTGTCCCATAACAGCTTCACTGGAAAAATTCCCAAAGGTTTTGAGCTGATGTCCACTCTTGAAAAACTTGACTTGCATGGGAATATGCTCGACGGTCATTTAGATGCCGGATTTATTTTTTTATCAAGTGCCAGTTATGTTGATTTCAGTGATAACAGGCTAGTGAGTTCTGATTCCCAGAGGCAGAAGTTTCTGCCGCAGATATCTGAAAGTATCAATCATCTAAATCTAAGTCACAACTTGCTTACTGGGACATTAGTTAGTGGAGCCGAGCAACCAGTTTTCGAAAACTTGAAGGTGTTGGACCTCAGCTACAATAATTTGGATGGAGAATTGCCTGGCTTTGATTTTGTTTACGATCTTGAGGTCCTTAAGCTTAGCAACAACAGATTTTCAGGATTTATTCCTGATGGCCTACTAGAAGGAGACTCTTTGGTTTTAACCGAACTGGATTTGAGTGCCAACAATCTCTCAGGACCACTAAGTATGATTACATCAACGACACTGCATTTTCTTAATCTCTCGTCAAATGGATTTACCGGTGATCTGCCGCTGCTGACTGGAAGCTGTGCTATACTTGATCTGTCAAACAACAAATTTAAAGGAAATTTAACGAGGATGGTGAAATGGGGGAACATAGAATATCTTGATCTCAGTGTGAATCATTTGACAGGGAGCATCCCTGAGGCAACTCCTCAATTTTTGAGATTGAATTATCTGAATCTGTCACATAATTCTCTTAGAAGCTTCCTCCCAAGAATCTTAACACAGTATCCAAAGCTTAGAGTGCTTGACATTAGTTTCAATCAGTTAGATGGACTACTTCCAGCCGAGCTGCTCGCAATGCCTACTTTGCACGAGCTCCACCTTGAAAATAATATGATCTCTGGCAGCATTAATTTATCATCTTCTACTGGTCATTCCGATCTTCAAATTCTTGACCTTTCTCACAACCGGTTTAATGGCTATTTTCCTGATCAGTTTGGGTCATTAACTGGCATGAAAGTTCTCAACATCGCTGGAAACAGTTTTTCTGGCTCTCTTCCAACCACTATTGCTGACATGATTTCACTAGAAACCTTGGATATGTCGGAAAATCACTTCACTGGTCCTCTACCAAATAACATGCCGAAGGGCCTCAACAACTTTAATGTTTCACAAAATGATCTCTCTGGAGTTGTTCCAGAAGATCTTAGAAATTTCACTAGTTCTTCTTTCTTTCCAGGGAATGCTAAGTTACATTTTCCAAATGGTCCTCCTGGATCAACCGCTTCGTCACCTGAAGGTTCCAAGAGGAAACATATGAACACTTTCGTTAAAGTAATAATTATAGTGTCATGTGTGGTTGCTCTATTCATATTAATCTTGCTTGCTATCTTCATACACTACATATGTATATCAAGATCTTCACCACAATATGATACAAGTAAAGATATCCACGGGCGTGCTCAACCAATCATCTCTGGCCCTGTTCCTGTTCCTGTTCGTACATCAGAAAGGGGTGGTGCTTTGGTTGTATCAGCTGAGGACCTTGTGACCTCACGTAAAGGATCACCGTCAGAACCAATCAGCCCTGATGAAAAAATGGCAGCTGTAACTGGTTTCTCTCCATCTAAAGCCAGCCGCTTTTCGTGGTCACCAGAGTCTGGTGATTCACTTCCTGCTGAAAATCTTGCAAGGCTAGACACAAGATCCCCAGATAGGTTGGTCGGAGAGCTGCATTTTCTTGATGAAACAATAGCATTGACACCCGAGGAGCTGTCAAGGGCTCCGGCTGAAGTTTTGGGCAGAAGCAGTCACGGTACTTCTTACAAAGCAACTCTGGACAATGGTTTATTGTTGAGAGTAAAGTGGTTGAGAGAAGGCGTAGCGAAACAGAGAAAAGAATTTGTTAAAGAGATTAAAAAGTTCGCAAACATCAGACATCCTAATGTTGTGGGATTGAGAGGATATTACTGGGGCCCTACGCAGCACGAGAAGCTTATTCTTTCCGATTACATATCACCGGGAAGTCTTGCAAGTTTCCTTTACGATCGGCCAGGAAGAAAAGGTCCACCATTAACATGGGCACAAAGGCTCAAAATAGCAGTTGATGTAGCACGCGGCCTGAACTATCTCCATTTTGATCGCGCTGTTCCTCATGGGAACCTGAAAGCTACAAATGTGTTGCTAGATACAGCTGATATGAACGCACGTGTTTCTGATTACTGTCTTCACCGGCTTATGACTCAGGCTGGTACTGTTAAGCAAATTCTCGATGCAGGAGTTTTGGGCTATCGTGCACCAGAATTAGCTGCTTCCAAGAAACCAATGCCCTCCTTCAAATCAGATGTTTACGCTTTTGGAGTGATACTTTTGGAACTTTTATCTGGAAGGTGTGCTGGTGATGTGATATTTGGAGATGACGGAGGTGTTGATATGACCGATTGGATAAGGTTGCGGGTAGCAGAAGGTCGAGGCTCAGAATGTTTTGATGCTACATTGATGTCAGAAATTAGTAAAACTGCTGTAGAAAAGGGAATGGAGGTTCTAGGCATAGCCATTCGATGCATTAGATCTGTTTCCGAAAGGCCCGGAATCAAGACTATATATGAAGATCTTTCTTCTATATAG 3201 0.418 MKLFSLLVLSLSFFSVMGQLPSQDILALLEFKKGIRHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSTDADLSVFSNLTKLVKLSMSNNFISGNLPDNIGNFKSLQFLDISNNLFSSSLPSGIGNLGSLQNLSLAGNNFSGLIPETISKMASIQSFDLSRNSFSGAMPASLTKLKSLVSLNLSHNSFTGKIPKGFELMSTLEKLDLHGNMLDGHLDAGFIFLSSASYVDFSDNRLVSSDSQRQKFLPQISESINHLNLSHNLLTGTLVSGAEQPVFENLKVLDLSYNNLDGELPGFDFVYDLEVLKLSNNRFSGFIPDGLLEGDSLVLTELDLSANNLSGPLSMITSTTLHFLNLSSNGFTGDLPLLTGSCAILDLSNNKFKGNLTRMVKWGNIEYLDLSVNHLTGSIPEATPQFLRLNYLNLSHNSLRSFLPRILTQYPKLRVLDISFNQLDGLLPAELLAMPTLHELHLENNMISGSINLSSSTGHSDLQILDLSHNRFNGYFPDQFGSLTGMKVLNIAGNSFSGSLPTTIADMISLETLDMSENHFTGPLPNNMPKGLNNFNVSQNDLSGVVPEDLRNFTSSSFFPGNAKLHFPNGPPGSTASSPEGSKRKHMNTFVKVIIIVSCVVALFILILLAIFIHYICISRSSPQYDTSKDIHGRAQPIISGPVPVPVRTSERGGALVVSAEDLVTSRKGSPSEPISPDEKMAAVTGFSPSKASRFSWSPESGDSLPAENLARLDTRSPDRLVGELHFLDETIALTPEELSRAPAEVLGRSSHGTSYKATLDNGLLLRVKWLREGVAKQRKEFVKEIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVSDYCLHRLMTQAGTVKQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLSGRCAGDVIFGDDGGVDMTDWIRLRVAEGRGSECFDATLMSEISKTAVEKGMEVLGIAIRCIRSVSERPGIKTIYEDLSSI 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0316 1066 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lal11g0316 1066 PANTHER OS07G0626500 PROTEIN 6 1066 - -
Lal11g0316 1066 ProSiteProfiles Protein kinase domain profile. 785 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0316 1066 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lal11g0316 1066 SUPERFAMILY L domain-like 41 380 - -
Lal11g0316 1066 Pfam Protein tyrosine and serine/threonine kinase 789 986 IPR001245 GO:0004672|GO:0006468
Lal11g0316 1066 Gene3D Ribonuclease Inhibitor 500 613 IPR032675 -
Lal11g0316 1066 Gene3D Phosphorylase Kinase; domain 1 776 862 - -
Lal11g0316 1066 Gene3D Ribonuclease Inhibitor 289 405 IPR032675 -
Lal11g0316 1066 Pfam Leucine Rich repeat 293 307 IPR001611 GO:0005515
Lal11g0316 1066 SMART LRR_typ_2 141 164 IPR003591 -
Lal11g0316 1066 SMART LRR_typ_2 430 453 IPR003591 -
Lal11g0316 1066 SMART LRR_typ_2 551 575 IPR003591 -
Lal11g0316 1066 SMART LRR_typ_2 117 140 IPR003591 -
Lal11g0316 1066 SMART LRR_typ_2 314 338 IPR003591 -
Lal11g0316 1066 SMART LRR_typ_2 291 313 IPR003591 -
Lal11g0316 1066 SMART LRR_typ_2 454 477 IPR003591 -
Lal11g0316 1066 SMART LRR_typ_2 189 212 IPR003591 -
Lal11g0316 1066 SMART LRR_typ_2 93 116 IPR003591 -
Lal11g0316 1066 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Lal11g0316 1066 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Lal11g0316 1066 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Lal11g0316 1066 SUPERFAMILY Protein kinase-like (PK-like) 788 1061 IPR011009 -
Lal11g0316 1066 Gene3D Transferase(Phosphotransferase) domain 1 864 1066 - -
Lal11g0316 1066 SUPERFAMILY L domain-like 268 599 - -
Lal11g0316 1066 Gene3D Ribonuclease Inhibitor 20 288 IPR032675 -
Lal11g0316 1066 PANTHER - 6 1066 - -
Lal11g0316 1066 Gene3D Ribonuclease Inhibitor 406 496 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0316 Lal-Chr11 2280034 2285402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0316 1 1054 Receptor kinase-like Gene Family AT1G55610 27.512 8.07e-78 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal11g0316 PK_Tyr_Ser-Thr 8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0316 - - gmx:100793639 1759.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0316 11 2280034 2285402 Lal11g0316 11 2280034 2285402 ECH
Lal5g1597 5 18444811 18450147 Lal11g0316 11 2280034 2285402 LSH
Lal3g0174 3 1160836 1166028 Lal11g0316 11 2280034 2285402 LSH