Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0279 ATGGCCTCATCTCTCATCCCACCAAACCCTAACCCACCCACAACAGATCTCTCACGTGACCATCGCAGGAAAAAGAAGAACCTTCAGAAACATCACAATCAGAATCAACATCATCAACATGGCCACGTCAAATGGAAATCACAGAAGCAGCAACAAATTTACTCATCCAAGCTCCGTCAAGCGTTGACCAGAGTCAACCTTACCGGAAACCGAAACGGGAAAGAAGTCCGGGAAGCCGCCGACAGGGTACTCGCCGTCACAGCCAAGGGGAGGACACGGTGGAGCAGAGCCATCCTCAAAAACAGGCTAAAGCTTAAGTTCAGGAAGCAGCACAAGAGAAAGAGAGTGGTTTCTTCTTCGACCGGTTCAGATCGGTTTAAGAAACAAACCCGGTTCAGTGTGTTCGGATTAAAAGGAAAAACGGTTCCGGCTTTTCAAAGGAAAGTGAAGGTTCTGGGCCGGTTGGTTCCGGGTTGCAGAAAAGAACCGTTGCCGGTTATTTTAGAAGAAGCTATTGATTATATACCAGCTCTTCAGATGCAGATTCGAGCCATGACAGCTCTTTCTCAATTACTTTTCGCCTCTTCTGCTGGCGGCGCCGCCTCTAGCTCCGCCACTTTTGGTCCTTTATAG 633 0.4866 MASSLIPPNPNPPTTDLSRDHRRKKKNLQKHHNQNQHHQHGHVKWKSQKQQQIYSSKLRQALTRVNLTGNRNGKEVREAADRVLAVTAKGRTRWSRAILKNRLKLKFRKQHKRKRVVSSSTGSDRFKKQTRFSVFGLKGKTVPAFQRKVKVLGRLVPGCRKEPLPVILEEAIDYIPALQMQIRAMTALSQLLFASSAGGAASSSATFGPL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0279 210 CDD bHLH_AtIBH1_like 139 188 IPR044549 GO:0006355
Lal11g0279 210 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 8 205 - -
Lal11g0279 210 MobiDBLite consensus disorder prediction 1 52 - -
Lal11g0279 210 MobiDBLite consensus disorder prediction 23 45 - -
Lal11g0279 210 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 205 IPR044660 GO:0006355
Lal11g0279 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 194 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0279 Lal-Chr11 1972514 1973146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0279 44 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 56.250 4.73e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0279 - - gmx:100792237 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1652 5 18824855 18825472 Lal11g0279 11 1972514 1973146 LSH
Lal3g0141 3 907837 908400 Lal11g0279 11 1972514 1973146 LSH
Lal14g1584 14 16382210 16382824 Lal11g0279 11 1972514 1973146 PCT
Lal7g0980 7 16076439 16077038 Lal11g0279 11 1972514 1973146 PCT
Lal11g0279 11 1972514 1973146 Lal14g1584 14 16382210 16382824 PCT
Lal11g0279 11 1972514 1973146 Lal7g0980 7 16076439 16077038 PCT