Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0276 ATGGCTTATTCATCATCATTTCATGCTTCAACATTTGTACTTGCAATAATTCTCATTTTCACCTTGTGTTGCATGCCATGTAGTGGTCTTGGAACTGATGCAAAAATGGTCATAGATTCTCCTTTGTTAACAGAAAGGTTAGGAATTAATCGTACTATCATAGTAGATATTAATGGAAAAGGGGACTTCAAATCTGTCCAAGCTGCCATAGATTCCATTCCTGAAGGAAATTCTAATTGGGTAATTGTGCATGTTAGGAAAGGAATATACAGAGAAAAGGTGCACATACCAAAGACTAAGCCTTATATATTCATGCGAGGGAATGGGAAAGGAAAAACTGCCATTGTTTGGTCACAAAGCTCTGAGGACAATGTGGCTTCTGCTACCTTTAAAGCCGAAGCAAAAGACTTCATTGCCTTTGGAATAAGCTTCAAGAATGAGGCACCTACTGGGGTTGCATATACATCACAGAATCAATCAGTGGCAGCATTTGTAGCAGCAGATAAAATAGCATTCTACCATTGTGCATTTTATAGTACTCATAACACTCTCTTTGATTACAAAGGAAGACATTACTATGAGTCCTGCTACATTCAAGGCTCAATTGATTTCATATTTGGTCGTGGAAGATCAATATTCTATGGTTGTGAAATGTTTGTGATTGCTGATGAAAGGGTAACAATTCATGGGTCAATCACAGCTCAACATAGGGAAAAAGAGCATGAGATTAGTGGTTTCATCTTTATCAAAGGCAAGGTCTATGGCATTGGTGGGGTGCACTTAGGAAGGGCTAAAGGTCCTTTTTCTAGGGTGATTTTTGCCATGACATACCTTTCCAAAACCATTGTGCCTGAGGGGTGGACCAATTGGAGCTATGATGGTAGCACACAAAATGTATTGATGGGGGAATACAAGACTCATGGACCTGGAGGCACTGTAGAAGGACGTGTTCCTTGGTCAAGGCAACTTACTGGCCAAGAAGTTGCACCCTATTTATCTATTGATTACATTGATGGGAAGAATTGGTTGCCAGCTTATTGGCAATAA 1047 0.3973 MAYSSSFHASTFVLAIILIFTLCCMPCSGLGTDAKMVIDSPLLTERLGINRTIIVDINGKGDFKSVQAAIDSIPEGNSNWVIVHVRKGIYREKVHIPKTKPYIFMRGNGKGKTAIVWSQSSEDNVASATFKAEAKDFIAFGISFKNEAPTGVAYTSQNQSVAAFVAADKIAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSIFYGCEMFVIADERVTIHGSITAQHREKEHEISGFIFIKGKVYGIGGVHLGRAKGPFSRVIFAMTYLSKTIVPEGWTNWSYDGSTQNVLMGEYKTHGPGGTVEGRVPWSRQLTGQEVAPYLSIDYIDGKNWLPAYWQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0276 348 Pfam Pectinesterase 53 339 IPR000070 GO:0030599|GO:0042545
Lal11g0276 348 PANTHER PECTINESTERASE 67-RELATED 11 347 - -
Lal11g0276 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 347 - -
Lal11g0276 348 SUPERFAMILY Pectin lyase-like 49 346 IPR011050 -
Lal11g0276 348 ProSitePatterns Pectinesterase signature 2. 198 207 IPR033131 -
Lal11g0276 348 Gene3D - 47 347 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0276 Lal-Chr11 1961109 1962968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0276 50 343 Carbohydrate Esterase AT5G47500 37.171 1.51e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0276 - - gmx:100792967 563.918