Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0274 ATGGGAAATCCAGAAGTTGTAGAAGAAAGAGAGATTCTTCTGAAGAAGATTAAAGACCTAGAAGCTGTTCAGGTTGACCTGAAACAGGAGATGTCAAAGCTCAAGCTTTCATCATCATTTAAGGATCTTCATCAACAACAACATCATCATCACCACCATAGGCATAGGTCTCATTCACTTTCACCACAACGTTCAAGGTTGAGAAAGGAAGCACCAACACCACCACCACTTGCATCTAACAAAGCTTCTTCTTCTTCTTCTTCTTCCCCTTTGCAGAGGGAAAGTAAGAGTGATGAGCTTCAACACCATGGTTCTGTGAACCTCACTGATAGGGAGTGTCTCAATATATTGCAGTCAATGGGTCACTCTCTTCATATATTGGATCTTCAATGCCGAATCATATACTGGAACCCCAGTGCTGAAAATCTGTATGGTTATGTAGCAGCAGAAGTTCTTGGCAGGGATGGGATTGAGTTGCTTATAGATCCCAAGGATTTTGGTTTAGCTAGTGATGTATTCAATCGTGTCACAATGGGAGAGAGCTGGACTGGCCAGTTCCTTTTGAAGAATAAGATTGGGGACACGTTTTTAGCTGCGGCAACCAATACACCTTTCTATGACGATGGTGGAAACTTGGTTGGGATTATTTGTGTCTCAAGTGATTCAAAACCCTTTCTTGCAATGAAAGTTCCATTTTCAGGTGTAAAGAAAGCTGAACCAGATTCAGGTTCCACCTATCCTGGAAGTAGCATTACAAGTAAACTTGGGCTTGACTCTCAGCAGCCACTTCAAGTTGTTCTAGCATCAAAAATTTCAAATTTGGCATCAAAGGTGAGTAACAAGGTTAAGTCGAGAATCTGGACAGGAGAAGATAATCTCAATCGTGAAGGTGGGGGCGGAGAAAGTCATCATTCTGAGCACATTTTCTCAGACTCTGCTCTTTCTGATCAGAGAGAAGATGCCAATTCCAGTGGAGCTAGCACTCCTAGAGGAGATCTGCAACCCTGTCCTTTTGCAGTATTTTCTCATGTTGAAGAGAAATGCCAAGGGAATTCTCTGAGAGACTCTGGCAATGAGAATGAAGGAAAACCTATTCACAAGATCATGGCTTCTAAGGCTGAAGCATGGATTCAAAAGAGAACATTATCATGGCCATGGAGAGCAAATGGTAGGGAAGGATCTGAGGCAAGGAATGTTCATGTTGCTTGGCCTTGGTTGCCGAGTGATCAAGAAAATGAGTTAGTTAATCATAAGAATGTTTGTTATGGGTTGAAGCTTGAGACCCAGGCAGTTGAAAGTAATCAACATGTTAATAATGAGGCTACAGGATCCTGGTCCTCCTTTAATGTTAACAGCTCAAGTAGTATCAGCAGTTGTGGAAGTAGCAGCAGTTGTCCTACCAATAATAAAGTGGATTCCAACACTGATTGCTTGGATTATGAAATTTTGTGGGAGGACTTGACGATTGGAGAACAGATTGGGCAAGGTTCTTGTGGAACTGTTTATCATGCTCTGTGGTATGGATCAGATGTTGCCGTCAAGATTTTCTCAAAGCAATACTCAGATGATGTGATAATGTCCTTCAGACAAGAGGTATCTGTCTTGAAAAGACTTCGTCATCCAAATATTCTCCTCTTTATGGGGGCAGTGACTTCACCTCAACATCTATGCATTGTGACAGAGTTTTTCCCACGGTTTGTCTTGAACTTTATCTCTGACCGCTTTATGATGAGCATTCTGATTCTTGTTCGTGGAAGCTTGTTTCGTATGCTTCAGAGAAACGCAGCCAAACTTGACTGGAGACGGCGAGTTCAAATGGCCTTAGATATCGCGAGAGGTGTAAATTATCTTCATCATTACAACCCCCCTATCATCCATCAAGATCTAAAGTCTTCAAATATTCTAGTTGATAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGTCTGAAGTATGAAGCATTTCTCACAACTAAGACCGGAAGGGGCACGCCCCAGTGGATGGCACCAGAAGTTCTTCGAAATGAACCCTCGGATGAGAAGTCTGACGTTTACAGCTTTGGGGTGATATTGTGGGAACTTGCAACCAAAAAGATCCCTTGGGATACTCTAAACATAACACAGGTTACCGGAGCTGTAGGGTTTATGAACCATCGGCTAGAAATTCCAGAAGATGTTGATCCACAGTGGGCTTGTATAATTAAGAGCTGCTGGCATAGTGATTCAGCTTGCCGGCCAACATTCGAGGAACTTTTAGAAAGGCTTAAAGAACTGCAGAAACAGTTTGCTGTTAAGTTTCAGGCGGCAGCCCGGTCCAATGGCAGGGAAAGCACTCAAAATGAGTCCTAG 2355 0.4268 MGNPEVVEEREILLKKIKDLEAVQVDLKQEMSKLKLSSSFKDLHQQQHHHHHHRHRSHSLSPQRSRLRKEAPTPPPLASNKASSSSSSSPLQRESKSDELQHHGSVNLTDRECLNILQSMGHSLHILDLQCRIIYWNPSAENLYGYVAAEVLGRDGIELLIDPKDFGLASDVFNRVTMGESWTGQFLLKNKIGDTFLAAATNTPFYDDGGNLVGIICVSSDSKPFLAMKVPFSGVKKAEPDSGSTYPGSSITSKLGLDSQQPLQVVLASKISNLASKVSNKVKSRIWTGEDNLNREGGGGESHHSEHIFSDSALSDQREDANSSGASTPRGDLQPCPFAVFSHVEEKCQGNSLRDSGNENEGKPIHKIMASKAEAWIQKRTLSWPWRANGREGSEARNVHVAWPWLPSDQENELVNHKNVCYGLKLETQAVESNQHVNNEATGSWSSFNVNSSSSISSCGSSSSCPTNNKVDSNTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKIFSKQYSDDVIMSFRQEVSVLKRLRHPNILLFMGAVTSPQHLCIVTEFFPRFVLNFISDRFMMSILILVRGSLFRMLQRNAAKLDWRRRVQMALDIARGVNYLHHYNPPIIHQDLKSSNILVDKNWTVKVGDFGLSRLKYEAFLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATKKIPWDTLNITQVTGAVGFMNHRLEIPEDVDPQWACIIKSCWHSDSACRPTFEELLERLKELQKQFAVKFQAAARSNGRESTQNES 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0274 784 TIGRFAM sensory_box: PAS domain S-box protein 116 219 IPR000014 -
Lal11g0274 784 CDD STKc_MAP3K-like 493 750 - -
Lal11g0274 784 Pfam Protein tyrosine and serine/threonine kinase 487 757 IPR001245 GO:0004672|GO:0006468
Lal11g0274 784 SMART pas_2 111 178 IPR000014 -
Lal11g0274 784 MobiDBLite consensus disorder prediction 45 62 - -
Lal11g0274 784 MobiDBLite consensus disorder prediction 77 94 - -
Lal11g0274 784 SMART serkin_6 487 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0274 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Lal11g0274 784 MobiDBLite consensus disorder prediction 312 333 - -
Lal11g0274 784 Gene3D Transferase(Phosphotransferase) domain 1 584 771 - -
Lal11g0274 784 Gene3D Phosphorylase Kinase; domain 1 476 563 - -
Lal11g0274 784 ProSiteProfiles Protein kinase domain profile. 487 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0274 784 MobiDBLite consensus disorder prediction 39 104 - -
Lal11g0274 784 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 39 776 - -
Lal11g0274 784 CDD PAS 126 221 IPR000014 -
Lal11g0274 784 Gene3D PAS domain 122 224 - -
Lal11g0274 784 Coils Coil 10 37 - -
Lal11g0274 784 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 39 776 - -
Lal11g0274 784 Pfam PAS domain 126 221 IPR000014 -
Lal11g0274 784 SUPERFAMILY Protein kinase-like (PK-like) 464 757 IPR011009 -
Lal11g0274 784 SUPERFAMILY PYP-like sensor domain (PAS domain) 115 218 IPR035965 -
Lal11g0274 784 MobiDBLite consensus disorder prediction 315 330 - -
Lal11g0274 784 ProSiteProfiles PAS repeat profile. 109 180 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0274 Lal-Chr11 1942956 1949524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0274 1 770 MAP Kinase Kinase Kinase AT3G06620 52.075 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal11g0274 PK_Tyr_Ser-Thr 2.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0274 - - gmx:100800867 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0975 7 16036513 16042883 Lal11g0274 11 1942956 1949524 PCT
Lal11g0274 11 1942956 1949524 Lal7g0975 7 16036513 16042883 PCT