Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0256 ATGAGTGCATCAGAAAACCCTAGCCCTAATAATACTAATAACCATTCTTCCTCATCATCCTCAACAACATTGAGGCTATTTGGTTTCCCACTAACCCCAGCTAGACACAAGAGATTCAAATGCAACTACTGTTGCCGTGAATTTTCAAATTCTCAAGCACTGGGTGGTCACCAAAATGCACACAAAAGAGAACGCCAAAAGGCCAAGCAAGAAAAGTTCCAAAACCTTCTTCATCACTATCATCAAAGGTTTATAGTACCTTCCTCTAACAATCATATCATGGTTGAACATGGAACACCATCATCAGGAGTACCTGTTTTTGTTCATGATCCACTTGCTTCTGTGGAAGATCATGAAGCTTGGTTCTCAAATGCACTTCATAGAACAAACCCACAACCTTTGTTGTCCATGATCCCTGATGATGAGAGGCTTCATCAGCTTCATTTTTTGCCTAGATCTAAAGGTGTTGTTGATCTTAATTTGGTTCCAGCTAGCATGCCCTATAATTCAAAGGACAATGACTTTGGCAGGAGGACTTGA 540 0.4056 MSASENPSPNNTNNHSSSSSSTTLRLFGFPLTPARHKRFKCNYCCREFSNSQALGGHQNAHKRERQKAKQEKFQNLLHHYHQRFIVPSSNNHIMVEHGTPSSGVPVFVHDPLASVEDHEAWFSNALHRTNPQPLLSMIPDDERLHQLHFLPRSKGVVDLNLVPASMPYNSKDNDFGRRT 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0256 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Lal11g0256 179 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Lal11g0256 179 Gene3D Classic Zinc Finger 16 92 - -
Lal11g0256 179 PANTHER ZINC FINGER PROTEIN 8-LIKE 10 114 - -
Lal11g0256 179 PANTHER ZINC FINGER PROTEIN 5 10 114 IPR044299 GO:0010090
Lal11g0256 179 SUPERFAMILY beta-beta-alpha zinc fingers 36 66 IPR036236 -
Lal11g0256 179 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0256 Lal-Chr11 1830988 1831527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0256 37 74 C2H2 Transcription Factor Family AT1G68360 65.789 6.14e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0256 - - lang:109334113 287.345