Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0252 ATGAACCGGACTGAACCAGGATTCAAACTTAACAACAAAACCGCTCCCAAATCGCTATTTAAATTTACCGCCAACACTGTTCTCTGTTCAATTCAACATCCCTTCCTTAATTCTCAATTCAAAATCAATCTACGCTTTCTCCAATTGCTGTGGATTTTCTCGATCGAACTCGAAGCCATGTCGCTGAGGCCTAATGCCAGGATTGAGAGTCGCCGCAACCGGTACAAGGTGGCTGTCGACACGGATGAGAGTCGCCGGAGGAGGGAGGATAACATGGTGGAGATCCGAAAGAACAAGCGCGAAGAGAGCCTCCAGAAGAAACGTCGTGAATGTCTCCAATCTCAGCTGAAGTTCCAAACTCCTCTTCAAAATTCCACCAATGTAGAGAAAAAGTTAAAGAATCTTACTGAGATGGTTGCTGCGGTATGGTCTGAAGATAAAACCCAGCAACTCGAAGAAACTGCGCAATTTCGGAAGCTTCTTTCTATTGGGTCCAGCCCTCCAATTGAGGAAGTTATTCAGTCTGGTGTTGTCCCGCGTTTTGTTCAGTTTCTTGATAGGGAGGATTTCCCTCAACTTCAGTTTGAGGCTGCGTGGGCTCTCACAAACATAGCATCTGGAACTTCTATGAACACCAAGGTTGTGATTGATCATGGAGCAGTCCCTATATTTGTCAAGCTACTTAATTCACCTAATGATCATGTTCGGGAGCAGGCTGTGTGGGCATTGGGAAATGTTGCTGGTGACTCCCCTAGGTTCCGCGATCTTGTTCTAGGCCATGGTGCCCTGATCCCACTATTAGCCCTGTTGAATGAGAATGCAAAAATTTCAATGCTGAGAAATGCCACATGGACTCTGTCAAACTTTTGCAGGGGAAAGCCACAACCTCCATTTGAAAAGGTGAGGCCAGCACTTCCAACTCTCAAGTGTTTGGTTCATTCCAATGATGAAGAGGTTCTAACAGACGCATGCTGGGCACTATCATGTCTTTCTGATGGAACAAATGACAAAATCCAAGCAGTTATTGAGGCAGGTGTATGTACTCGATTGGTGGAGCTTCTTCTGCATCCATCTCCTACAGTGCTGATTCCTGCTCTTCGTACAGTGGGTAATATTGTGACTGGAGACGATATACAGACGCAGGCTATTATAGACCATGGTGCACTCCCATGCATTTTGAACCTGTTGAAAAGTAACCATAAAAAGAATATCAAGAAAGAAGGTTGTTGGACCATATCCAACATTACAGCTGGAAACAAAGAACAAATACAGGCTGTTATTGAAGCTGGTGTGATTGCTCCCCTTATCAATCTTCTTCAAAATGCTGAGTTTGACGTTAAAAAGGAAGCTGTCTGGGCAATCTCAAATGCTACATCTGGTGGTACTCATGAGCAGATCAAGTATTTGGTAAGCCAAGGTTGCATTAAGCCTCTATGCGACCTTCTTGTTTGTCCCGACCCAAGAATTGTCACTGTCTGTTTAGAAGGTCTAAAGAATATTCTGAAGGTTGGGGAATCTGAGAAGAGCTTGGGTAACACAGAAGATGTCAACTTGTATGCTCAGATGATAGATGATGCTGAGGGATTGGAGAAAATTGAAAACCTGCAGAGTCATGACAACAATGAGATATATGAGAAGGTTGTTAAAATTCTCGAAACATATTGGTTGGAAGATGAAGATGAGACACTACCTTCAGGAAATAATGCTACAAGTGATTTCAATTTTGGAAGTAACAAGCTTCCAATCCCATCTGGTGGATTCAACTTCAGTTGA 1773 0.4354 MNRTEPGFKLNNKTAPKSLFKFTANTVLCSIQHPFLNSQFKINLRFLQLLWIFSIELEAMSLRPNARIESRRNRYKVAVDTDESRRRREDNMVEIRKNKREESLQKKRRECLQSQLKFQTPLQNSTNVEKKLKNLTEMVAAVWSEDKTQQLEETAQFRKLLSIGSSPPIEEVIQSGVVPRFVQFLDREDFPQLQFEAAWALTNIASGTSMNTKVVIDHGAVPIFVKLLNSPNDHVREQAVWALGNVAGDSPRFRDLVLGHGALIPLLALLNENAKISMLRNATWTLSNFCRGKPQPPFEKVRPALPTLKCLVHSNDEEVLTDACWALSCLSDGTNDKIQAVIEAGVCTRLVELLLHPSPTVLIPALRTVGNIVTGDDIQTQAIIDHGALPCILNLLKSNHKKNIKKEGCWTISNITAGNKEQIQAVIEAGVIAPLINLLQNAEFDVKKEAVWAISNATSGGTHEQIKYLVSQGCIKPLCDLLVCPDPRIVTVCLEGLKNILKVGESEKSLGNTEDVNLYAQMIDDAEGLEKIENLQSHDNNEIYEKVVKILETYWLEDEDETLPSGNNATSDFNFGSNKLPIPSGGFNFS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0252 590 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 387 430 IPR000225 GO:0005515
Lal11g0252 590 PANTHER IMPORTIN SUBUNIT ALPHA 61 579 - -
Lal11g0252 590 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 219 261 IPR000225 GO:0005515
Lal11g0252 590 ProSiteProfiles IBB domain profile. 55 117 IPR002652 GO:0006606|GO:0061608
Lal11g0252 590 SMART arm_5 293 332 IPR000225 GO:0005515
Lal11g0252 590 SMART arm_5 165 206 IPR000225 GO:0005515
Lal11g0252 590 SMART arm_5 376 417 IPR000225 GO:0005515
Lal11g0252 590 SMART arm_5 419 459 IPR000225 GO:0005515
Lal11g0252 590 SMART arm_5 462 502 IPR000225 GO:0005515
Lal11g0252 590 SMART arm_5 249 291 IPR000225 GO:0005515
Lal11g0252 590 SMART arm_5 208 248 IPR000225 GO:0005515
Lal11g0252 590 SMART arm_5 334 374 IPR000225 GO:0005515
Lal11g0252 590 Gene3D - 133 556 IPR011989 -
Lal11g0252 590 Pfam Importin beta binding domain 71 154 IPR002652 GO:0006606|GO:0061608
Lal11g0252 590 Pfam Atypical Arm repeat 517 564 IPR032413 -
Lal11g0252 590 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 176 219 IPR000225 GO:0005515
Lal11g0252 590 Gene3D - 69 110 IPR036975 GO:0006606
Lal11g0252 590 PIRSF Importin_alpha 61 589 IPR024931 GO:0005737|GO:0006606|GO:0061608
Lal11g0252 590 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 430 458 IPR000225 GO:0005515
Lal11g0252 590 PANTHER IMPORTIN ALPHA 61 579 - -
Lal11g0252 590 Pfam Armadillo/beta-catenin-like repeat 209 247 IPR000225 GO:0005515
Lal11g0252 590 Pfam Armadillo/beta-catenin-like repeat 165 206 IPR000225 GO:0005515
Lal11g0252 590 Pfam Armadillo/beta-catenin-like repeat 335 373 IPR000225 GO:0005515
Lal11g0252 590 Pfam Armadillo/beta-catenin-like repeat 419 458 IPR000225 GO:0005515
Lal11g0252 590 Pfam Armadillo/beta-catenin-like repeat 379 417 IPR000225 GO:0005515
Lal11g0252 590 Pfam Armadillo/beta-catenin-like repeat 463 500 IPR000225 GO:0005515
Lal11g0252 590 Pfam Armadillo/beta-catenin-like repeat 250 291 IPR000225 GO:0005515
Lal11g0252 590 SUPERFAMILY ARM repeat 64 561 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0252 Lal-Chr11 1800254 1803957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0252 211 451 U-box Gene Family AT1G23030 20.576 6.52e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0252 K15042 - gmx:100808498 910.212