Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0250 ATGTCAACGCTTAGTTCAACTTCACTTCTGAAATTTTCCGGCACCGTCTCCGACCAGTTTCCGGCGGGTCTCCGGGTACTTGTGGTGGATGATGACCCCACTTGTCTTATGATCCTTGATAGGATGCTTCGTGCTTGCTTCTATGAAGTGACCAAATGCAAGAGAGCAGAGATCGCATTGTCTCTTCTGAGAGAGAACAAAAATGGGTTTGATATTGTTCTAAGCGACGTGCATATGCCCGATATGGACGGTTTTAAACTTCTAGAGCATATTGGATTGGAGATGGACCTTCCGGTTATTATGATGTCGGCAGATGATGGAAAGCAAGTTGTAATGAAGGGTGTGACACATGGTGCTTGCGATTATCTAATTAAACCCGTGCGTATTGAGGCTTTGAAGAATATATGGCAGCATGTGGTTCGGAAAAGAAAGAATGGGTGGAAAGATCTGGAGCAGTCGGGTAGTGTAGACGAAGGAGATCGGCAGCTAAAGGCATCTGATGATGCAGATTATTCATCATCTGCAAATGAAGGGAAATCCTCAAAGAAGAGAAGAGATGAGGAAGAAGATCCAGATGAGAGGGATGATTCTTCAACGTTAAAGAAGCCACGAGTCGTTTGGTCTGTTGAACTCCATCAACAGTTTATGGCTGCTGTCAATCAACTGGGTCTCGACAAGGCTGTTCCTAAAAAGATTCTGGAATTGATGAATGTTCCTGGGTTAACTAGAGAAAATGTTGCTAGCCACCTCCAGAAATACCGTTTGTATCTTAGAAGGCTTAGTGGAGTATCACCGATGCAGAATAACTTGAACAACCCCTTCATCAGCCCCCAAGCGGCATCATTTGGGGCAACTTCAATCAATGGAATTGATCTTGAAACACTTCAAGCTTCTGGCCACCTCCCAGCACAAAGTCTAGCCAAGCTTCAAGCAGCAGGGCTTGGCAGGCCAACTGCAAACGCAGGTGCATCTATATCTCTAGTGGAACAAAGGAACCTTTTCAATTTTGAGAACCCGGGAATAAGATTTGGAGAAAGCCAACTGCAACATTTGAGCAATAGTAAACCAACAAACTTACTTCACGGAATCCCTACCAACATGGAGCCAAAGCAGCTTGCCAATTTGCACCAACCTACCCAGTCCCTTGGCAACTTGAACATGGGAGTAAATTCTTCTGCTGCACAGAGCAACCCCTTGTTGATGCATATGGCTCAATCCCAATCAAGAGGTCAGGTGCTAAGTGAAAATACTGGTTCTCATGTTAATAGGCTTTCATCATCTTTGGTGCAGCCTACATTACCAAATGGAATTTCTAATGGTGTTTTGGGAAATGGGGTTTCTGGTATGAGCAACATAACTTCTGCTTATAATCCAGTTCAACAAACCTCTTCAATGTTGAGTTTTCCCATGAACCAATCGACTGAAATGTCTGTCAGTACTTTTCCTCTTGGAAGCACTCCACGGATATCCAATATGGCAACAAAAGGCATGTTTCATGAGGAAGTTTCTATGCGAATTAAGGGATCAAGTGGATCTGTTCCAAGTTATGATATCTTTAATGAACTCAATCATCATCAGAAGTCTCATGATTGGGACATAACGAATGTGGGCCTAATATTTGATGCCTCTCAGCATGCAAATCCTTTACAAGGTAACATTGACGTCTCACCGTCAGTTATAGTCCATCAGAGTTTTCCCTCTATCCACCAGACTGGACAAAATAGAGATGCTACTTCAATTAGAAAAGGTACGTTCTCAATAGGTGAAGGCATGAGTCACGGTAATCTTCAAAACATTGCTCAACACCTCAATACACATCTTGTTGACAATTCAGTAAAGGTCAAAGCTGAAAGAATTCTTGATCCAAGATCCCAGATTAATCTCTTCCCTGATCAGTATGGGCAGGAGGATCTTATGAGCGCACTTCTGAAGCAGCAAGGAGACATTGGATCAGCTGAAAATGAGTTTGATTTTGATGGATATTCCTTAGACAACATTCCGGTCTAG 2007 0.4305 MSTLSSTSLLKFSGTVSDQFPAGLRVLVVDDDPTCLMILDRMLRACFYEVTKCKRAEIALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNGWKDLEQSGSVDEGDRQLKASDDADYSSSANEGKSSKKRRDEEEDPDERDDSSTLKKPRVVWSVELHQQFMAAVNQLGLDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPMQNNLNNPFISPQAASFGATSINGIDLETLQASGHLPAQSLAKLQAAGLGRPTANAGASISLVEQRNLFNFENPGIRFGESQLQHLSNSKPTNLLHGIPTNMEPKQLANLHQPTQSLGNLNMGVNSSAAQSNPLLMHMAQSQSRGQVLSENTGSHVNRLSSSLVQPTLPNGISNGVLGNGVSGMSNITSAYNPVQQTSSMLSFPMNQSTEMSVSTFPLGSTPRISNMATKGMFHEEVSMRIKGSSGSVPSYDIFNELNHHQKSHDWDITNVGLIFDASQHANPLQGNIDVSPSVIVHQSFPSIHQTGQNRDATSIRKGTFSIGEGMSHGNLQNIAQHLNTHLVDNSVKVKAERILDPRSQINLFPDQYGQEDLMSALLKQQGDIGSAENEFDFDGYSLDNIPV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0250 668 MobiDBLite consensus disorder prediction 150 167 - -
Lal11g0250 668 Gene3D - 199 261 - -
Lal11g0250 668 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 636 - -
Lal11g0250 668 MobiDBLite consensus disorder prediction 177 201 - -
Lal11g0250 668 SUPERFAMILY CheY-like 23 144 IPR011006 -
Lal11g0250 668 Pfam Myb-like DNA-binding domain 204 254 IPR001005 -
Lal11g0250 668 SUPERFAMILY Homeodomain-like 199 259 IPR009057 -
Lal11g0250 668 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 258 IPR017930 -
Lal11g0250 668 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 636 IPR045279 GO:0009736
Lal11g0250 668 SMART REC_2 24 136 IPR001789 GO:0000160
Lal11g0250 668 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Lal11g0250 668 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 202 255 IPR006447 GO:0003677
Lal11g0250 668 PIRSF RR_ARR_type-B 5 660 IPR017053 GO:0003677|GO:0003700|GO:0009736
Lal11g0250 668 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Lal11g0250 668 CDD REC_typeB_ARR-like 26 140 - -
Lal11g0250 668 Gene3D - 24 154 - -
Lal11g0250 668 MobiDBLite consensus disorder prediction 150 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0250 Lal-Chr11 1787883 1791805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0250 58 668 Response Regulator Gene Family AT3G16857 48.706 1.41e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Lal11g0250 Response_reg 1.9e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0250 - K14491 gmx:100809583 1016.53