Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0243 ATGGGACAAGAACTAGATTACAAAACCAAGTTGGTATTGGATATTTGCTCAATATCCACCCATTCAGTTGCATGTGTTCATAGACTTGTCTCAAACCAAGCTAAAGCATCTTTTATTGATTGGTATTGCATTCTTGGTGTGGAAGAAAATGCTGGAATAAATACAATTCACAAGCAATACCATAAACTTGCCTTGTTACTTCACCCAGATAAAAATAAACACCCAAATGCTGAAATTGCTTTCAAGCTTGTCTCTGAGGCAAATACATGTTTATCTGATGCTGCAAAAAGAAAAGCTTTTAACTTAAAGAGGTATCAAAACTTGTGCTATGAGTGCAACAAAACCCCCAGCACTTCTTGCAATGGTTCAAGTTTCAAGGCATGGAACAATATCAGCAGTGCCAAATCTAGTAAACTTTGGAGAAATGTTAGGGACATGAGAGAAAGGTTGAAGGAAGAGGCTAAGGTAATAGAGAATTGTTTGCAGGCAAATTCAATGTCCAAGAATGAATCTCCACTTTACAATCCAGCTGATTATATAAACAGAAAGAGGTTTCATCATAGATTTGAGAAAGAAATCCCTGTGTTCAATCCATCTAACTACTCTTACCAAGGGAACCCTCATTCTAAGAGCTATGCTTACAAGAATTCTGAGACATGTTGGTACTTGCAATCAGAAAAGATAGGACACAATGAAAAAGGAGGAGATAAGTATTCTTCCCCAGTTTTTGAAGTCAAAACACAAAGAAGAATGTTCACAACCAAATTTTCTTATGTCCCATCAAGATGTTAG 792 0.3649 MGQELDYKTKLVLDICSISTHSVACVHRLVSNQAKASFIDWYCILGVEENAGINTIHKQYHKLALLLHPDKNKHPNAEIAFKLVSEANTCLSDAAKRKAFNLKRYQNLCYECNKTPSTSCNGSSFKAWNNISSAKSSKLWRNVRDMRERLKEEAKVIENCLQANSMSKNESPLYNPADYINRKRFHHRFEKEIPVFNPSNYSYQGNPHSKSYAYKNSETCWYLQSEKIGHNEKGGDKYSSPVFEVKTQRRMFTTKFSYVPSRC 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0243 263 PANTHER BNAC03G44070D PROTEIN 4 252 - -
Lal11g0243 263 CDD DnaJ 40 93 IPR001623 -
Lal11g0243 263 PRINTS DnaJ domain signature 42 60 IPR001623 -
Lal11g0243 263 PRINTS DnaJ domain signature 60 75 IPR001623 -
Lal11g0243 263 PRINTS DnaJ domain signature 76 96 IPR001623 -
Lal11g0243 263 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Lal11g0243 263 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 252 - -
Lal11g0243 263 Pfam DnaJ domain 40 101 IPR001623 -
Lal11g0243 263 Gene3D DnaJ domain 39 155 IPR036869 -
Lal11g0243 263 SUPERFAMILY Chaperone J-domain 31 105 IPR036869 -
Lal11g0243 263 SMART dnaj_3 39 96 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0243 Lal-Chr11 1734546 1736491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0243 40 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.455 1.19e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0243 - - gmx:100778573 365.925