Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0242 ATGCTTGAAAGAGAACCATGGTTACTTTCATGCAACCCCAACAAAAGGGTTTTGCCAAAGTTTGAATTTTTACTCTCAAAAGGTGCTTCTACCTCTGACATTGTTTCCATTGTGAACAAGACACCCAGGTTCCTAAGTCCTAGTTTGGAGAATCATATAATCCCAACATATGAATTGGTACATAGATTTTTGTTATCTGATGAGGAAACTGTAGCTTGTATAATACGTAACACACTTTCCTTTTGTTCTAGTAGAATGGTACATAATATCAAATTGTTGATTGAGTGTGGAGTTTCTGATTCAAACATTGCCATATTGCTTAGAAAATGGCCTAGTATACTTTGTTCAATTGGCTTGCTTAAGGAAGTGAATGAAGTTAAGAGATTGGGATTTAATCCTTCAAAAACAACTTTTAGTATTGCATTGCTTGCAAAACATACTGTGTCCAAATCCAAATGGGATGAGAAAATTGGTGTTTTTAAGAAATGGGGGTGGAATGATGAAACCATTCTTGAAGCATTTAGGAGGCAACCTAATTGCATGTTAGTATCTTGTGATAAGATTAATGTAGTGATGAATTTTTGGGTCAATGAGTTGGGTTGGGATGTTTTAGCCCTTGTTAGAGGACCAGATCTATTTGGATTTAGTTTAGAGAAAAAGATTATTCCAAGGGCTTATGTACTCAAGTATCTTTTGGGAAAAGGTTTAATGAAAAAAGATGCTAGCTTGATTACACCATTTAGAATCTCTGAGATTTTGTTCCTGCAAAAGTTTGTGGAGTGTTTTGAGGAGGAGGAAACATCTCAACTTTTGAATATATATTGGGAAAAATTGAATGTTCAAGATAACAGTGATAAAGGCTGCATTAATAAAGTTACAAATGATGAACTTATGAGATGCTAA 903 0.3444 MLEREPWLLSCNPNKRVLPKFEFLLSKGASTSDIVSIVNKTPRFLSPSLENHIIPTYELVHRFLLSDEETVACIIRNTLSFCSSRMVHNIKLLIECGVSDSNIAILLRKWPSILCSIGLLKEVNEVKRLGFNPSKTTFSIALLAKHTVSKSKWDEKIGVFKKWGWNDETILEAFRRQPNCMLVSCDKINVVMNFWVNELGWDVLALVRGPDLFGFSLEKKIIPRAYVLKYLLGKGLMKKDASLITPFRISEILFLQKFVECFEEEETSQLLNIYWEKLNVQDNSDKGCINKVTNDELMRC 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0242 300 SMART mt_12 1 30 IPR003690 GO:0003690|GO:0006355
Lal11g0242 300 SMART mt_12 35 66 IPR003690 GO:0003690|GO:0006355
Lal11g0242 300 SMART mt_12 71 99 IPR003690 GO:0003690|GO:0006355
Lal11g0242 300 SMART mt_12 203 237 IPR003690 GO:0003690|GO:0006355
Lal11g0242 300 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Lal11g0242 300 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 283 - -
Lal11g0242 300 PANTHER CGI-12 PROTEIN-RELATED 1 283 IPR003690 GO:0003690|GO:0006355
Lal11g0242 300 Pfam mTERF 2 132 IPR003690 GO:0003690|GO:0006355
Lal11g0242 300 Pfam mTERF 85 254 IPR003690 GO:0003690|GO:0006355
Lal11g0242 300 Gene3D Transcription termination factor 3, mitochondrial 78 266 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0242 Lal-Chr11 1731988 1732890 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal11g0242 mTERF 2.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0242 K15032 - gmx:102663414 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1224 14 14142315 14143793 Lal11g0242 11 1731988 1732890 PCT
Lal7g0701 7 13985348 13987082 Lal11g0242 11 1731988 1732890 PCT
Lal11g0242 11 1731988 1732890 Lal14g1224 14 14142315 14143793 PCT
Lal11g0242 11 1731988 1732890 Lal7g0701 7 13985348 13987082 PCT