Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0222 ATGCATTTCCCTTTAACTATCCCTCTATCACTTGCAAGAATTTGGTTACACTTTAACTTATTCATCTCCTTTGTTCTCATTAACCGCTACCTAGTCGAGGCTACAAATGCAGACAACAAAGTTATATCTATTGGGGCTATCATTGATGGTAATTCCCGAATCGGGAAAGAACAGCAAGTAGCCATGGAAATTGCAGCTCAAAGTTACAATAACACTACAAAGTCCTTCAAGTTGGCTCTCTATTTCCGGAACTCCACGAAAGATCCCCTCACGGCCATCTCGCTTGCTGAAGAAATGATTAATACACAGAAGGTGCAAGTGATTATAGGGATGCACACATGGTCAGAAGCAGTTCTAGTTTCTGAAATTGGAAGCCAAGCTCAAGTTCCAATAATTTCCTTTGCAGGACCTACCATTATCCCACCATTGATGCAAATTCGATGGCCTTTTCTAGTGACATTGGCTAACAACGGTACATCATATATTGAATGCATTGCAGATATAGTGCAAGCTTATAGCTGGCAAAGAGTAGTAGTCATTTATGAAGATGATGCATATGGTGGAGATTATGGTAAGCTAGCACTGCTATCTGAGGCCCTCCAAGATGTAGGTTCAATGATTGAATACCATTTAGCTCTCCCACCAATTTCTTCTCTATATGATCCAAAAGATCTAATACGCGAAGAGCTTCAAAATTTAATGATGCAAACACAATCTAGAGTGTTCATTGTGCTGCAATCATCATTACAAATGGTAATTCATTTGTTCAAAGAGGCTTCAAAAATGAGACTTGTGGATAGAGACTCAGTTTGGATAACTCCTGAAAGCATAACTAATTTGCTCGATTCTGTCAATAAATCTGTTATTCCCTATATGGAAGGAGCTTTAGGAATCAAGACATATTACTCTGAAAGGAGCAGTGAGTATCAACATTTTGAGGCTAAGTTCAGGAGAACATTTTTGGCCAAGAACTCTGAGGAAGATAACCGCTACCCTGGATTTTATGCTTTGCAAGCACATGATAGCATTAAAATTGTCACTCAAGCAGTAGAAAGAATGAATAAGAACAACAATAGCAGCCCAAAGAATTTATTAAGAGAAATATTGTCTAGCAATTTCCATGGTTTAAGTGGACAAATTAAATTTGAAGCAGGACAACTCTCGCAAAGTCCTACATTACGGATAGTAAATGTGGTTGGTAAGAGTTACAAAGAACTATGCTTTTGGACTCAAAAACAAAGTTTCAACACAAGCCTCCCTAGTGAACAAGGTGGGAATAATGTTTCGGGTGATACAGAATGTTTCAAAGGTGTACACTGGCCTGGGAATTTGCAGCGAGATCCAAAGGGCTGGAACATGCCTTCTCTACAAAATCGATTGAAAATCGCAGTCCGAAGCAGAACCTCTTTTGCCAGGTTTGTCAAGGTTGATGATCAAAACAATTATAGTGGATTCTGCATTGAAATTTTCGATCTTGTGCGTGGACTTTTGAAATATGATCTGCCATATGATTTTTATCCCATTGATGGAACCTATGAGGATTTGGTTCGACTTGTCTATAACAAGACTTATGATGCTGCTGTTGGAGACATGACCATACTAGAGGAAAGATTGCAGTATGTGGATTTTACTGTGCCATATGCAGAATCAGGATTGTCAATGATAGCTCCAACAAAGTCTGAAGAGTCAACATGGTTGTTTACAAAGCCTTTTACCTTGGAATTGTGGATAGTTACAGGTGCCATCTTGATTTACACAATGTTTGTAGTTTGGTACCTTGAGAGGATACCAAATCCAGATTTTCATGGCAATTGGAAGAGTCAAATCAGCACTGCTCTTTGGTTTACCTTCTCCTCTCTTTTCTTTGCTCATAGGGAAAAAATGCATAGCAACTTGACTCGCGTGGTGATGGCGTCATGGCTCTTTCTAGTTTTGATTCTTAACTCAAGCTACACTGCTAGTCTTTCTTCAATGCTCACAGTAAAACAACTGCAACCAAACATCACAGACATTGAGTGGCTGAAGAGGAACAACATGAAAATTGGTTGTGATGGTGACTCATTTGTTAGGTCTTACCTAGAGAAAGTAGAGAAGTTCAAGCCAGAGAACATCATAAACATTACTGATGAATATACTTATGCTGATGCATTGACAAATAAAAGCATAGCAGCTGCATTTCTTGAACTTCCATATGAAAAAGTATTCATTGGTGAATACTGCAAGAAATTTGCTGGCTCCACTCCTCTAAACAGATTTGGAGGATTAGGCTTTATATTCCAAAAAGGCTCTCCCTTGACTAGAGATTTTTCTAAAGCTATATTACATCTATCAGCAAATGCAGAGCTGAAGAAATTGGAAGAAAAGTGGTTGATTAAATCAAAAGAATGCTTCATCAACATGACCTCAAACAATGATGATACAGATAGTTTGAACCTTGGAAGCTTATGGGTTCTATATGTAATTTCTGGTGCAACTTCCACCATTTGTGTTATACTATCAACCATACAGTGGCTAAAATCCAGTTACCAACATCAACATGTGGCACCAGTAGCCAATGTTGCTACACCAAGTGATGATTTGAAAAGTGTAGTAACACTTCCAAAGCAGATTTCTAGCAAAAGGGTCAATAATGCAAGTGAGGATTATAGAGCAATTAGCATTGGGAAAAGATTAAGAGTGAAAGCAATGAGAGTAGTGGTTGAGCGAGTTGCTTCTGCATCCGTGGAAGTTGATGGCCGCATTGTCTTCTCGTCCTTATGCCGGAAGGTCTTGAATATGAGATTGTTCCCAAATCAAAACACTTCTAAAACATGGGACCACAGTGTCATCCACAAAAATTATCAACTTCTTTTAGTGAGTCAGTTTACCTTGTATGGATTCCTCAAGGGTAACAAGCCTGATTTTCACGTTGCAATGCCACCTGAGCAAGCCAAGACCTTCTATGCTTCTTTAGTTGAAAGGTTTAGGAATGCCTATAACCCAGATGCTGTAAAAGATGGTGTATTTGGGGCAATGATGAAGGTTAACTTACAATTTCCTTTATTGTTACAATACCTTAACACTAGCTATGTAAATTTAGTTAACGATGGACCGGTTACCATGCAGCTCGATTCACAATCACCCAAGAATACTGTTGATGCAGCAGAATCTTGA 3153 0.3879 MHFPLTIPLSLARIWLHFNLFISFVLINRYLVEATNADNKVISIGAIIDGNSRIGKEQQVAMEIAAQSYNNTTKSFKLALYFRNSTKDPLTAISLAEEMINTQKVQVIIGMHTWSEAVLVSEIGSQAQVPIISFAGPTIIPPLMQIRWPFLVTLANNGTSYIECIADIVQAYSWQRVVVIYEDDAYGGDYGKLALLSEALQDVGSMIEYHLALPPISSLYDPKDLIREELQNLMMQTQSRVFIVLQSSLQMVIHLFKEASKMRLVDRDSVWITPESITNLLDSVNKSVIPYMEGALGIKTYYSERSSEYQHFEAKFRRTFLAKNSEEDNRYPGFYALQAHDSIKIVTQAVERMNKNNNSSPKNLLREILSSNFHGLSGQIKFEAGQLSQSPTLRIVNVVGKSYKELCFWTQKQSFNTSLPSEQGGNNVSGDTECFKGVHWPGNLQRDPKGWNMPSLQNRLKIAVRSRTSFARFVKVDDQNNYSGFCIEIFDLVRGLLKYDLPYDFYPIDGTYEDLVRLVYNKTYDAAVGDMTILEERLQYVDFTVPYAESGLSMIAPTKSEESTWLFTKPFTLELWIVTGAILIYTMFVVWYLERIPNPDFHGNWKSQISTALWFTFSSLFFAHREKMHSNLTRVVMASWLFLVLILNSSYTASLSSMLTVKQLQPNITDIEWLKRNNMKIGCDGDSFVRSYLEKVEKFKPENIINITDEYTYADALTNKSIAAAFLELPYEKVFIGEYCKKFAGSTPLNRFGGLGFIFQKGSPLTRDFSKAILHLSANAELKKLEEKWLIKSKECFINMTSNNDDTDSLNLGSLWVLYVISGATSTICVILSTIQWLKSSYQHQHVAPVANVATPSDDLKSVVTLPKQISSKRVNNASEDYRAISIGKRLRVKAMRVVVERVASASVEVDGRIVFSSLCRKVLNMRLFPNQNTSKTWDHSVIHKNYQLLLVSQFTLYGFLKGNKPDFHVAMPPEQAKTFYASLVERFRNAYNPDAVKDGVFGAMMKVNLQFPLLLQYLNTSYVNLVNDGPVTMQLDSQSPKNTVDAAES 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0222 1050 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 22 900 - -
Lal11g0222 1050 CDD GluR_Plant 458 790 - -
Lal11g0222 1050 Pfam Ligand-gated ion channel 791 823 IPR001320 GO:0015276|GO:0016020
Lal11g0222 1050 Gene3D - 564 703 - -
Lal11g0222 1050 SUPERFAMILY Periplasmic binding protein-like I 39 451 IPR028082 -
Lal11g0222 1050 SMART AABind_6 459 792 IPR001638 -
Lal11g0222 1050 Pfam Receptor family ligand binding region 59 399 IPR001828 -
Lal11g0222 1050 Gene3D - 159 338 - -
Lal11g0222 1050 PANTHER GLUTAMATE RECEPTOR 3.4 22 900 - -
Lal11g0222 1050 Gene3D - 911 1012 IPR023509 -
Lal11g0222 1050 CDD PBP1_GABAb_receptor_plant 43 419 IPR044440 -
Lal11g0222 1050 SUPERFAMILY DTD-like 895 1038 IPR023509 -
Lal11g0222 1050 SUPERFAMILY Periplasmic binding protein-like II 448 791 - -
Lal11g0222 1050 Pfam Bacterial extracellular solute-binding proteins, family 3 466 790 IPR001638 -
Lal11g0222 1050 Gene3D - 460 563 - -
Lal11g0222 1050 SMART GluR_14 459 792 IPR001320 GO:0015276|GO:0016020
Lal11g0222 1050 Gene3D - 716 797 - -
Lal11g0222 1050 Gene3D - 339 459 - -
Lal11g0222 1050 Pfam D-Tyr-tRNA(Tyr) deacylase 917 1010 IPR003732 GO:0002161|GO:0005737|GO:0051499
Lal11g0222 1050 Gene3D - 36 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0222 Lal-Chr11 1603639 1613302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0222 17 846 Ion Channels AT2G29120 31.981 7.55e-132 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0222 - - gmx:100818619 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0222 11 1603639 1613302 Lal11g0222 11 1603639 1613302 ECH