Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0221 ATGGATATTCATAATAATAACCATGCAAATTCTGAAGGGATTCTTGAGAATGTATGGGCTAAAATTATGAATAGTGATAGAGAAAATAGAAGAACAAGTGAAGTAGCAGAATCTTGTAATTCATGGGAAATTTTGCCTAATCTTGATGGAAGAAATAATGGGTCTATGGAAATGCTGCAAAGGCTTCCAAGTTTAGGAAGATGGATATCAATGGGAGCTGAATTTTGGGAAGAAGTTTTAGATGATATTCTTCCAACTACAAACAACACAGAAGATTATTCTAGTAGTAACAAAGATTTGGAAATTGTGAGTGTTACTAAATGCAATAAAAAGTTAGAAAATGATGTGAAAAAAGAGAAAGTAGTTGTTGCAAAACACTATAGGGGTGTAAGAAGAAGGCCATGGGGTAAATATGCAGCAGAAATTAGAGACTCTACAAAAAAAGGTGCTAGAGTTTGGCTTGGAACATTTAATACAGCTGAAGAAGCAGCTTTAGCTTATGATAAAGCTGCATTGAGAATTAGAGGAACTAAAGCATACTTGAATTTCCCACTTGAGACAGTTTCAAAGGCTTTAGGATTTACATTATGTGATTTCACTACTTGTCAAAAGGGTTGCTATGCATGTTCATATGTTGAGAACAAAGATAATTGTTACAAATCCAAGAAGAGGGTATCAAGGGAAAGTGAAGAATTTGTTGATATGATGATGGTGATGAATGAAGAACATGCAACAAAAAAGGTGGCAACATTAGAGAATGAAATAGATGTTCTTGTATTTCAGGACCTAGGTACTGATTATTTGGACACTTTGCTATCTTCTTTTTGA 828 0.3394 MDIHNNNHANSEGILENVWAKIMNSDRENRRTSEVAESCNSWEILPNLDGRNNGSMEMLQRLPSLGRWISMGAEFWEEVLDDILPTTNNTEDYSSSNKDLEIVSVTKCNKKLENDVKKEKVVVAKHYRGVRRRPWGKYAAEIRDSTKKGARVWLGTFNTAEEAALAYDKAALRIRGTKAYLNFPLETVSKALGFTLCDFTTCQKGCYACSYVENKDNCYKSKKRVSRESEEFVDMMMVMNEEHATKKVATLENEIDVLVFQDLGTDYLDTLLSSF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0221 275 CDD AP2 126 184 IPR001471 GO:0003700|GO:0006355
Lal11g0221 275 SMART rav1_2 126 190 IPR001471 GO:0003700|GO:0006355
Lal11g0221 275 SUPERFAMILY DNA-binding domain 126 186 IPR016177 GO:0003677
Lal11g0221 275 Pfam AP2 domain 126 176 IPR001471 GO:0003700|GO:0006355
Lal11g0221 275 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 16 275 - -
Lal11g0221 275 Gene3D AP2/ERF domain 125 186 IPR036955 GO:0003700|GO:0006355
Lal11g0221 275 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Lal11g0221 275 PRINTS Ethylene responsive element binding protein signature 150 166 IPR001471 GO:0003700|GO:0006355
Lal11g0221 275 ProSiteProfiles AP2/ERF domain profile. 126 184 IPR001471 GO:0003700|GO:0006355
Lal11g0221 275 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0221 Lal-Chr11 1600369 1601196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0221 14 275 AP2-EREBP Transcription Factor Family AT4G18450 36.741 9.26e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal11g0221 AP2 3.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0221 - - lang:109334345 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0221 11 1600369 1601196 Lal11g0221 11 1600369 1601196 ECH