Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0211 ATGACATGGTGCAATGATTCTGATGAGGAGAGGGGCATTGAAATTGAATCAATCACGCCTACTATTACTCCTAGAGGTAATAACAACAACACTAGAGCAATGAGACTTACACAAGATATTCGAACCATAACTTGCCCCTCATGCGGCCATAACATTCAATTCCAAGATCAGGGTGGAATTAATGAGTTGCCGGGGTTACCAGCTGGAGTGAAATTTGATCCAAGTGACCAAGAGATTCTAGAGCATTTGGAGGCAAAAGTGGTGTCTAATGTACAAAAGCTTCATCCTCTTATTGATGAGTTCATACCAACGCTTGAAGGGGAGAATGGGATTTGTTATACACACCCAGAAAAGCTACCAGGAGTAAGCAAAGATGGACAGATTCGCCACTTTTTTCACAGGCCTTCAAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCATACTGATGAAGAAGGAAGTGAGACAAGATGGCACAAAACAGGAAAAACTAGACCAGTTTTTGGTGTTGGTCCAGTGAAAGGTTTTAAAAAGATATTAGTACTTTACACCAACTATGGCAGACAAAAGAAGCCTGAAAAGACTAATTGGGTTATGCATCAATATCATCTTGGTAGTAATGAAGAAGAAAAAGATGGAGAATTAGTGGTCTCAAAAGTCTTCTACCAAACACAACCTAGACAATGTGGTAATAATAATAATAACTCCTTTATAAAGGACCCGTATGAAAATAAACACAATAACCAAATTGGCCATGATGATAGTGCAATATTACCTAAAAATGCATCTCCTTTGAACTACTACGATGCTCCTCAGTACATAAACTATGATCATGTTGTTCAAGATAGAGAAAGCTCACCTCAACTTATTCCAAACATGGTTACTCATCAAGGTGATGGCTCTTCTTTTATTCGCTTAGAAGTGGGTCATGCATACAAAGCAAGGCTTGAGCGAAAGTAA 966 0.3872 MTWCNDSDEERGIEIESITPTITPRGNNNNTRAMRLTQDIRTITCPSCGHNIQFQDQGGINELPGLPAGVKFDPSDQEILEHLEAKVVSNVQKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFGVGPVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNNNNNSFIKDPYENKHNNQIGHDDSAILPKNASPLNYYDAPQYINYDHVVQDRESSPQLIPNMVTHQGDGSSFIRLEVGHAYKARLERK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0211 321 ProSiteProfiles NAC domain profile. 66 225 IPR003441 GO:0003677|GO:0006355
Lal11g0211 321 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 301 - -
Lal11g0211 321 SUPERFAMILY NAC domain 62 225 IPR036093 GO:0003677|GO:0006355
Lal11g0211 321 Gene3D NAC domain 75 229 IPR036093 GO:0003677|GO:0006355
Lal11g0211 321 Pfam No apical meristem (NAM) protein 67 206 IPR003441 GO:0003677|GO:0006355
Lal11g0211 321 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 301 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0211 Lal-Chr11 1529134 1532544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0211 1 308 NAC Transcription Factor Family AT1G28470 57.500 2.14e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal11g0211 NAM 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0211 - - gmx:100795920 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0211 11 1529134 1532544 Lal11g0211 11 1529134 1532544 ECH
Lal11g0211 11 1529134 1532544 Lal15g0647 15 4458388 4461783 ECH