Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0210 ATGTGTCAAACTCCAAATGGATATCCAAAGTCTTTAGTACAGCATGTGATTTTGACATACACTTGTATAAAAAGGGAGTTAAGTATTGCGGCCTCCGTTGCGATTGCAGAATTAATTGAAAATATCACAAAAATGAGTCATGTTGAGTATATTGCTTATGTTTTGGTCATGGTCACTCTATCCATAATTCTCATAGTTCTTGTTGTTGTTCTCATACTTTCTTGCAAGAAGAAACCAGTTGAATCAAAAGAAATACTTCCTGTGAAGCTTTATGCTCGTGCATACCCTTTAATTTCCATTTATGCTGTCACTGATGGCTTCAATGAAAGGAGAATTGTTGGCCAGGGTCCATTAGGAACTGTGTATGCAGGTTCACTTGAGAAACAAGAACTTGTAGCTGTGAAGAGGATTCACCCTTTTCATGTTTTGAGCAATGCAGGCTTTGGATTAGGATTCTCATCAGTGATGAAATGGCTCTCTTTAGCTCAACACCCCAACATAGTTCCCATAATAGGATTCTCAGAAGCACCAGGTGAGAGAGTTATATTGATGGAGTTTGTTCATTTGGAAAGCTTGAACTTTTATATGCAAGATGGGGCTTCACATTTGGATTGGAACAAGAGGTTAAGCATTGCATCTGGAGCAGCTAGAGGACTTCACTATTTACATGATGTAATGGCACCAAATATTGTACATGGGTGTGTTAAGTCCTCCAATATTCTTATTGATGTTAACTTTTGTGCTAGGGTTTCTGATTATGGCCTTAACTTTTTGGCACCTATGGAAAAAAGAGGGCTAGTAGGTTATGTAGATGATGAGTATTGGAATATAAGAGGTGGTGGTGGTGGTGGTGCTACTAAGGAGAGTGATGTTTATGGATTAGGGGTGATAATTTTGGAGCTTTTAAGTGGAAGAGAATGTAAGGGAGGGTTATTGGTGAAGTGGGCATTGCCTTTGATTAAGGAAATGAGTTTTAGTGAACTTTTGGATCCTAGGTTGGTGATTCCTTCTGATATGAGGCTTTTGGTTAGATTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGGAAGTGTAGACCTAGCATGGCTCAAGTAGCAACCATTTTGAACAACTTGGAGACCCAAGTGTGTCTCTAA 1140 0.3904 MCQTPNGYPKSLVQHVILTYTCIKRELSIAASVAIAELIENITKMSHVEYIAYVLVMVTLSIILIVLVVVLILSCKKKPVESKEILPVKLYARAYPLISIYAVTDGFNERRIVGQGPLGTVYAGSLEKQELVAVKRIHPFHVLSNAGFGLGFSSVMKWLSLAQHPNIVPIIGFSEAPGERVILMEFVHLESLNFYMQDGASHLDWNKRLSIASGAARGLHYLHDVMAPNIVHGCVKSSNILIDVNFCARVSDYGLNFLAPMEKRGLVGYVDDEYWNIRGGGGGGATKESDVYGLGVIILELLSGRECKGGLLVKWALPLIKEMSFSELLDPRLVIPSDMRLLVRLAKVASACVGNSRKCRPSMAQVATILNNLETQVCL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0210 379 Gene3D Phosphorylase Kinase; domain 1 72 186 - -
Lal11g0210 379 Pfam Protein tyrosine and serine/threonine kinase 110 369 IPR001245 GO:0004672|GO:0006468
Lal11g0210 379 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 45 378 - -
Lal11g0210 379 ProSiteProfiles Protein kinase domain profile. 107 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0210 379 Gene3D Transferase(Phosphotransferase) domain 1 189 377 - -
Lal11g0210 379 SUPERFAMILY Protein kinase-like (PK-like) 84 370 IPR011009 -
Lal11g0210 379 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 45 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0210 Lal-Chr11 1523531 1524922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0210 86 377 Receptor kinase-like Gene Family AT3G59420 37.419 1.14e-50 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lal11g0210 PK_Tyr_Ser-Thr 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0210 - - gmx:100808319 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0210 11 1523531 1524922 Lal11g0210 11 1523531 1524922 ECH