Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0209 ATGTTAACAATGCATTCCTTTCTATCCCTACTACTATTCTTCTTCCTCTTCCTCACACCAACTTTAACCCTCTCTTTAAACCAAGAAGGACTCTACCTCTACCAATTCAAACTCTCCCTCTCCGACCCTGACTCCACCCTCTCTACCTGGTCACTCCATTCCTCTAACCCATGCACCACCAACTGGTTCGGCATAACCTGTGACCCAACCAACTCAACCATAATCTCAATCAACCTCTCTAGTTCCAACCTTCAAGGCCCTTTTCTACCTTCACTTCTTTGTCGTCTTCCTTACTTAACTTCCATCACTTTCTTCAACAACTCCATCGATCAAACCCTTCCTTCTTCTATCTCCATGTGCCAAACCCTCACCCACCTTGACCTATCCCAGAATCTCATCACTGGGTCACTGCCTGAGTCACTTTCTGAACTTCCCCATCTTACTTATCTTGACCTTACTGGTAATAACTTCTCTGGGCCTATTCCGTTTTCCTTTGGAAAGTTCCAGAAGCTTCAAACTTTATCACTTGTTTATAATCTTCTAGAAGGTTCTATTCCTTATTCTTTAGGAAATGTTACTACACTTAGAATGCTTAACCTCTCTTTTAATCCATTCTCAGTTGCTCCGATTCCTTCTTCTCTTGGAAACTTAACTAACTTGGAAGTTCTATGGCTCTCTCAGTGTAACCTTGTGGGACCCATTCCTTATGAGTTTGGGAACTTGAAGAGTCTTGTGGTGTTGGATCTTTCGATGAATGGGTTGGATGGGAAGATACCGAGTTCGATTACTGGGTTGACTCGGTTGTGGCAGGTTGAGTTGTTTAATAACTCGCTTTCGGGTGAGTTGCCTGTGGGGATGGGTAATTTAACTGCATTGAGGCTTTTTGATGCTTCAATGAATCGTTTGAGTGGGAGGATTCCTGATGAGTTGACTCGGTTACCGTTGGAGAGTCTTAACCTTTATGAGAATTGGTTTGAGGGTGAGTTGCCGGCGAGTGTGGCGGATTCGCCGAATTTATATGAGATCAGGTTGTTCGGGAATAGGCTCTCTGGGAAGTTGCCGGAGAATTTGGGGAAGAATGCGCCGTTGAGGATGATTGATGTTTCGAATAATCAGTTTTCCGGTGAGATTCCGGCGAGTTTGTGTGATCGTGGTGAGTTGGAGGAGATTTTGATTATATATAACTCGTTCTCCGGTGAGATTCCGGCGAGTTTGGGAGCGTGCCAGAGTTTGATGCGTGTTAGGCTCGGATACAATAAGTTTTCCGGCGAGGTTCCACCGGGATTTTGGGCCCTGCCTCATGTTTATCTGCTTGAACTTGTTGATAACGAGTTCAGTGGTTCGATCGCGAGGACTATTGGTGGGGCGGCGAATCTATCGCTGTTGATTTTATCAAAGAACAATTTCTCAGGATGGATTCCTGAGGAGATTGGGTGGTTGGAACATCTTGAGGAATTTTCTGGTGGTGATAACTTGTTCAATGGTTCTTTGCCTGATAGTATTGTGAACCTTAGACAGCTTGGGACTCTTGATCTTCATAACAATAAGCTCTCAGGGGAGCTTCCTAAGGGAATTAAGTCATTGAAGAAACTCAATGAGTTGAATTTGGCTAATAATGACATTGGGGGGGATATCCCTAATGATTTTGGGAGTTTGCTTCAGCTTAATTTCCTCGATCTTTCGAATAACAAATTTTCAGGCAGAGTCCCTCTGGGGTTGCAAAATTTGAAGCTCAATGAGCTTAATTTGTCTTATAATCAGCTTTCTGGCGAAATTCCCCCAATGTTGGCTAAGGATATGTATAAGGCTAGCTTTGTGGGTAATCCTGGTTTATGTGGTGATTTGAAAGGCCTTTGTGATGGAGAAAATGAGGATAAGAAGGCTTCAGGTTTTGTTTGGTTGCTTAGATCTCTCTTCATTGTTGCCACATTAGTGTTTGTTGTCGGTGTCATTTGGTTCTACTTCAAGTATAGGAATTTCAAGAATGGCAAAGGAGGTATTGATAAGTCTAAGTGGACTTTAATGTCATTTCATAAACTGGGTTTTGGTGAAGATGAGATTTTGAACTGTCTTGATGAAGATAATGTGATAGGAAGTGGATCATCTGGGAAGGTCTATAAGGTTGTACTTAGCAGTGGGGAGGCCGTGGCTGTGAAGAAGATATTGGGAGGCGCTAAAATGGAAACTGGGGGTGGAGATGTCGAAAAGGGTAGGATTCAAGACAATGCTTTCGATGCGGAGGTTGAAACTTTGGGCAAAATTAGGCACAAGAACATTGTCAAGCTATGGTGTTGCTGCACCACCAGGGACTGCAAACTCTTGGTGTATGAGTACATGCCAAATGGTAGTCTTGGTGATTTGCTGCATAGCAGTAAAGGAGGATTGTTGGATTGGCCAACTAGGTTTAAGATAGCTGTTGATGCTGCTGAAGGTCTCTCTTATCTGCATCATGATTGTGTTCCTCCGATTGTCCACAGAGATGTGAAATCTAACAACATCTTGTTGGATGGGGACTTCGGTGCAAGGGTGGCAGATTTCGGAGTCGCTAAGGTAGTCGAATCCAATGGAAAAGGAACTAAGTCCATGTCCGTCATAGCTGGATCTTGTGGGTATATTGCACCAGAATATGCATACACACTTAGAGTGAATGAGAAGAGTGACATATATAGTTTTGGTGTTGTCATACTTGAGTTGGTTACTGGAAGGAAGCCTATAGACCCTGAATTTGGGGAAAAGGACTTGGTTACATGGGCATGCAGCACCTTGGATCAGAAAGGCATAGACCATGTTCTTGACTCAAGGCTTGATTCTTGTTTCAAAGAAGAAATTTGCAGGGTCCTCAACATTGGCCTCATGTGCACTAGTCCTCTTCCAATCAATAGGCCTGCTATGAGAAGAGTGGTCAAGATGGTCCTCAACATTGGCCTCATGTGCACTAGTCCTCTTCCAATCAATAGGCCTGCTATGAGAAGAGTGGTCAAGATGTTGTTGCAAGAGGTTGGCATAGAGAACCAAGCCAAGTCTTCCAAAAAAGATGGAAAATTGTCCCCTTATTACTATGATGATGGGTCAGATCATGGAATAGTTGTCTTAACCAACAATGAAATATGA 3111 0.4336 MLTMHSFLSLLLFFFLFLTPTLTLSLNQEGLYLYQFKLSLSDPDSTLSTWSLHSSNPCTTNWFGITCDPTNSTIISINLSSSNLQGPFLPSLLCRLPYLTSITFFNNSIDQTLPSSISMCQTLTHLDLSQNLITGSLPESLSELPHLTYLDLTGNNFSGPIPFSFGKFQKLQTLSLVYNLLEGSIPYSLGNVTTLRMLNLSFNPFSVAPIPSSLGNLTNLEVLWLSQCNLVGPIPYEFGNLKSLVVLDLSMNGLDGKIPSSITGLTRLWQVELFNNSLSGELPVGMGNLTALRLFDASMNRLSGRIPDELTRLPLESLNLYENWFEGELPASVADSPNLYEIRLFGNRLSGKLPENLGKNAPLRMIDVSNNQFSGEIPASLCDRGELEEILIIYNSFSGEIPASLGACQSLMRVRLGYNKFSGEVPPGFWALPHVYLLELVDNEFSGSIARTIGGAANLSLLILSKNNFSGWIPEEIGWLEHLEEFSGGDNLFNGSLPDSIVNLRQLGTLDLHNNKLSGELPKGIKSLKKLNELNLANNDIGGDIPNDFGSLLQLNFLDLSNNKFSGRVPLGLQNLKLNELNLSYNQLSGEIPPMLAKDMYKASFVGNPGLCGDLKGLCDGENEDKKASGFVWLLRSLFIVATLVFVVGVIWFYFKYRNFKNGKGGIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLSSGEAVAVKKILGGAKMETGGGDVEKGRIQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRFKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVESNGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRKPIDPEFGEKDLVTWACSTLDQKGIDHVLDSRLDSCFKEEICRVLNIGLMCTSPLPINRPAMRRVVKMVLNIGLMCTSPLPINRPAMRRVVKMLLQEVGIENQAKSSKKDGKLSPYYYDDGSDHGIVVLTNNEI 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0209 1036 SMART serkin_6 691 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0209 1036 Pfam Leucine Rich Repeat 530 552 IPR001611 GO:0005515
Lal11g0209 1036 Pfam Protein kinase domain 693 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0209 1036 ProSiteProfiles Leucine-rich repeat profile. 122 145 IPR001611 GO:0005515
Lal11g0209 1036 ProSiteProfiles Protein kinase domain profile. 691 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0209 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Lal11g0209 1036 SUPERFAMILY Protein kinase-like (PK-like) 687 971 IPR011009 -
Lal11g0209 1036 PANTHER LRR RECEPTOR-LIKE KINASE 12 971 - -
Lal11g0209 1036 PANTHER LRR RECEPTOR-LIKE KINASE 971 1012 - -
Lal11g0209 1036 Gene3D Transferase(Phosphotransferase) domain 1 779 975 - -
Lal11g0209 1036 Gene3D Ribonuclease Inhibitor 141 237 IPR032675 -
Lal11g0209 1036 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Lal11g0209 1036 SUPERFAMILY L domain-like 315 612 - -
Lal11g0209 1036 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Lal11g0209 1036 SUPERFAMILY RNI-like 76 398 - -
Lal11g0209 1036 Gene3D Ribonuclease Inhibitor 244 622 IPR032675 -
Lal11g0209 1036 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 971 - -
Lal11g0209 1036 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 971 1012 - -
Lal11g0209 1036 Gene3D Phosphorylase Kinase; domain 1 675 778 - -
Lal11g0209 1036 Pfam Leucine Rich repeat 574 591 IPR001611 GO:0005515
Lal11g0209 1036 Gene3D Ribonuclease Inhibitor 31 140 IPR032675 -
Lal11g0209 1036 Pfam Leucine rich repeat N-terminal domain 27 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0209 Lal-Chr11 1508187 1518309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0209 20 1030 Receptor kinase-like Gene Family AT1G28440 65.717 0.0 1346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal11g0209 Pkinase 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0209 - - gmx:100776936 1513.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0209 11 1508187 1518309 Lal11g0209 11 1508187 1518309 ECH
Lal11g0209 11 1508187 1518309 Lal15g0646 15 4447055 4451464 ECH