Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0207 ATGGAAGCAGAAGCAGAAAAGAATACTCAGAAGAGGGATGAAGAAGGTGATAATAGCAGTGAGAATAACAATGGAAGTAACAGCAAAATCGCGAATTCAAATGAGGGTCAGAGCAGGCCCAAGCGTCAAATGAAAACCCCATTTCAGCTTGAAATGCTAGAGAAAGCTTATGCTATGGAGACTTACCCCTCGGAGGAGACTAGGGCTGTGCTATCAGAGAAGTTGGGCCTGTCAGATCGGCAATTGCAGATGTGGTTCTGCCACCGGAGGTTGAAACACAAGAAGGAATCACAGCAAAAGAAGCTGCCGAAAACGATAGTGGCCCCGACTTTGCCAGATTCCCCCATAGATGACATTAAGTTGGGTCATGAACCTGATAATGAATATGGGTCCGGGTCGGGTTCTGGCTCTAGCATGTTTACCCATCCGGAGTTGAGGAATGTGGTGCCCCGTGGAGTACCAGGGTACTATGAGTCACCACAGACTATAATGGAGCTTCGAGCAATTGCTTGTGTGGAGGCACAATTAGGGGAGCCATTGACGGAGGATGGACCTGGTCTCGGCATAGATTTTGATCCATTGCCACCTGATGCTTTTGGGGCACCCATAGCTGTTACAGAACAGCAGAAGCGGCCTAGTCTTCCCTACGACAGTAAAATATATGAAGGACACAATGTTAGAACAAATAAGGCTATCATAAGGACATTCCCTGAATATCTGCCGTTTCTTCCTAATCAACCTGGCATTAAGGCTGATGCTTTTGGTCAATTGGACCCACCTCATTTACATGTTCCAATGGAAGGTCCTACCAGAACTCCTCCTTTTCACATGGGAAATGAGCAGTTACCCAGAATTCATGCTGCCCACAGTCATTCTTCCCGTGTTCGCCAACCAAGCACCTATTTATCTCCTCCCCTGCATAATGATGTTGCTTCCCGAATAGAACCTTACACAAACATAGCTGATGCTGGGATGAATACCCACTTTGCTGATCACCCGATTGTTGGGCAAGATAATTCTTATGCTTTACCCGGTGGACAAGTTTCCCATAACGACACAACGTTGCGGATGGAGAAGAAAAGAAAGAGTGATGATACCAGAGTTGCAAGGGAAGTTGAAGAATATGAGACGAGGATCAAGAAAGATTTTGAGAAACAAGATAATCTGAGACAAAAGAGTGAAGAGCGGTTAAGGAAAGAAACGGAGAGACAAGATCGTGAAAGAAAGAAGGAAGAAGAGAGGTTGCTGCGTGAGAGACAGCGAGAAGAGGAAAGATCTAAGCGTGACCAAAAACGGGAAATGGAACGAAGGGAAATTTTTTTGCTGAAAGAAAATATGAAAGCTGAGAAAAGGAGACAAAAAGAAGAGCTTCGCAGAGAGAAAGAGGCAGAGAGAAGGAAAGCTTCCCTTGAAAAGGCAGCTGCTCGTAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAATTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGACTATCCTCTATCATAAATCTTGATCTTGATACTCTGCAAAACCTTGAACAATTTAGGGATTCATTGTGTGTTTTCCCACCTAAGAGTGTAAAGCTGAGAGAGGCATTTGGTATTCAGCCGTGGATCAACTCAGAACAGAATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGAGTTATGGCCTTTTACCCTTGACGAGTTCATACAAGCATTGCATGACTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTCTTCTAAAGGTGATAATAAAAGACATTGAAGATGTTGCTAGGACACCTTCTACAGGATTAGGAGTGACCCAAAATGGAGCTGCTAATCCTGGAGGTGGGCATCCAGAGATTGTAGAAGGAGCATATTCATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCAGAAATTTTCCGACAGTTAGCATTGTCTGCTGGATTTGGACCGCAGTTGAAGAAAAGAAATATTACATGGTCTTATGCAAATGATAAAAACGAGGGAAAAAGTAGTGAAGATATTATCTCTACACTTCGTAATGGTTCAGCAGCTGAAAGTGCAGTTGCAAAAATGCACGAGAAAGGTCTTTTAGTTCCTCGAAGATCAAGACACCGGTTAACTCCTGGAACAGTTAAATTTGCAGCATTTCATGTTCTCTCGCTTGAGGGTAGCAAGGGTTTGACAATATTAGATCTGGCTGAAAAAATTCAGAAATCTGGTCTCCGGGACCTGACAACCAGCAAGACGCCTGAAGCATCAATTTCTGTGGCTTTAACAAGAGATACTAAGCTTTTTGAAAGAATAGCTCCCTCAACATATCGTGTACGATCTTCATTTAGAAAGGATCCTGCTGATGCTGATTCTATTCTTTCGGAAGCAAGAAAGAAAATACAAATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAAGAGGATTCGGAAAGTGATGAAGTTGATGAGGATCCTGAAGCAGATGAATTGGTAAATCCTTCCAGTGTGATCCGAAATTCTGAACAGTGTGAGGACACAAACATTTGCTCGTCACATGTAACAGAAAGTTTGGCTCATGATGTCGGACTTATTGAAAACGTCTTTGATAGAGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGGATGCTAATTGCCCCACTTCTGTTTCCAGACAATGTCTTGCATGTGAAGATTTGAATACAGAAAATCTTGATCAAGATAATATGGAAATTGATGAAAGCAAGTCTGGAGAGTCCTGGGTTCAAGGGCTTGCTGAAGGAGAATACTCTGATCTCACCATAGAGGAGCGTTTAAATGCTCTTGTTGTATTGGTTGGTGTGGCAAATGAAGGGAATTCAATCCGTGTTGTTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCTGAAGCGCAGATAGATAAAATTCGTCTAAAAGATGATAGTATTAATAAATTAGATTTCCCATCACTTATCAGGAATAAGGTTGAAACAGAATACACATATCCTGCTGTGGAGGGTAACCAAAGCCCATTGCTTGACATTAATATTCGCAATATTAATAATGAAGCATCGCCCAGCACTACAGAAAACCAAAAGGCTACCCCAGTTGCTCACAGGCTACCTGTGGAAAGGTCCTCATCAGCTAAAGATTTATGCCCGGGAACAGGTCCAGACAACCCTCAGACTCAGGTACCTGCACCATATTCGAAAAGGTCACGTTCACAGTTGAAATCTTATATCTCCCGCATGGCAGAGGAGATGTATGTCTACAGGTCTTTACCCCTTGGCCAAGATCGCAGACGTAATAGATATTGGCTGTTTGCTGCATCTGCTTCTAGCAATGATCCTGGTTCTGGCAGGATCTTTGTTGAATGTCATGATGATGGCATTTGGAGGCTTATTGATTCAGAAGAGGTCTTTGATGTTCTTTTGAAATCGCTCGATTCACGCGGGATCAGGGAATCTCATTTGCGTTTACTGTTGAAAAAGATTGAGAATTCTTTTAAAGAAAATGTTAGAAGGAACACAAATTGTGTTAAAATTGAGTGTCCTAGCAGTACTCTTCATAGCTTGAACTCTGAAACATCAGAAATTTCACCATCCATCAAAATTGAGCTTGGGAAAAGTGAGAGGGAGAAGATATCTGCGTTGAGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAAATCATCCATATTATGTGCAATGAAATCTGGGATAAAGAGATGCAAACCTCATGTGGACATTTGTGATATCTGTTTCAACCCTTATTTTGTTGAAGACTCCCATTGCAATTCCTGCCACCAGACTTTTCCCGCAAATAATGGATTTAATTTTTCCAAACATGCATTTCAATGTGAACAGAAGTTATCCAAAGACGTTTGTATTTCAGAATCTCCCCTTCCTTTACGGACAAGATTGCTTAAGTTCCTGTTAGCTTGTATTGAGGTATCTGTTCTGCCTGAAGCATTTGGAACAATTTGGACAGATGAACTTAGAAAGCATTGGGGCATGAAGTTGAGCAAATCATCTTCTGTTGTGGAACTTTTACAGATATTGTCCCTATTTGAGAGAGCACTACGACGGGAGTTTCTGTCGTCAAACTTTGCTACAACTGACGAATTGTTGGGATTCAGCAGTATGTCAGAAAGTGCACATGCTTCTACTGATCCTGAATCTGTTGCTGTACTTCCATGGGTTCCACAAACTACTGCAGCATTGTCTCTCAGGCTTTTTGAGATTGATTCATCCATCAGCTATGTAAAGCCTGTGAAACCCGAGCATCATGAGGAGAAAGAAGCGAGAGAATACATAAAGCTCCCTTCAAGATATACTCCCTTCAAATTCAAGAAGGAGGTTGAACCAGCAGAATTAGACCATGATGAATTCATTATAGATAAATCTGTTCCTAAGAAAGTTGTGCGAAGCGGCAATAAACGTGGACGAGGGTCTAATGATCAAGGACGGGGTAAAAAGCTGTCTAAAAGACCGTATAATTCCAAACGAGATATTGGCTGTCGTAATGATAAGGTCAATGAGAATCTAAGCCTCAAATTAAAACAACAGCAGGGACGAGGAACACGAGGACAAGCTGGTGGACGAGGGCGCCGAACAGTCAGGAAGCGGAGGGTGGAAAAGAGAGCTATTGAAGATTTGTTGCTCGGCAACATGGATGCTGGTCATAGCTTCCAGGTCAGTAGAGTACCATTGAGAAGCATAGATGAGGAATGGGAAGCTGAAAAGGCAAGTCCTATAACTACTGTCCACATGGATGTAGCTGATAACAGTAATAGTACTGAAGAGGTGGAATCTGACGATAATGGCCGAGCCGCGGAGTGTGACCGAGGAAACTGGGAGATAGGTTTTAATGGTATCCCTCACGGCAGATGGGGTAATGATTTGGTTGGAATGAGTGATGAAGATGTGAATGCTTCTGAAGATGGCAATGGCAATGGCATTGAAGAGGAGGATTCAGAGGCAGATGTTATGAATGAGGGTTCAGATGGAATGGCCAATAGAGTTGTAGTAAATGAAGAAGACTCAGACTTTGCTGTCTCTGAAGATTCTTCTGATTATTAG 5178 0.4237 MEAEAEKNTQKRDEEGDNSSENNNGSNSKIANSNEGQSRPKRQMKTPFQLEMLEKAYAMETYPSEETRAVLSEKLGLSDRQLQMWFCHRRLKHKKESQQKKLPKTIVAPTLPDSPIDDIKLGHEPDNEYGSGSGSGSSMFTHPELRNVVPRGVPGYYESPQTIMELRAIACVEAQLGEPLTEDGPGLGIDFDPLPPDAFGAPIAVTEQQKRPSLPYDSKIYEGHNVRTNKAIIRTFPEYLPFLPNQPGIKADAFGQLDPPHLHVPMEGPTRTPPFHMGNEQLPRIHAAHSHSSRVRQPSTYLSPPLHNDVASRIEPYTNIADAGMNTHFADHPIVGQDNSYALPGGQVSHNDTTLRMEKKRKSDDTRVAREVEEYETRIKKDFEKQDNLRQKSEERLRKETERQDRERKKEEERLLRERQREEERSKRDQKREMERREIFLLKENMKAEKRRQKEELRREKEAERRKASLEKAAARRIAKESMELIEDEQLELMELAAASKGLSSIINLDLDTLQNLEQFRDSLCVFPPKSVKLREAFGIQPWINSEQNVGNLLMVWRFLITFADVLELWPFTLDEFIQALHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGVTQNGAANPGGGHPEIVEGAYSWGFDIRNWQKNLNQLTWPEIFRQLALSAGFGPQLKKRNITWSYANDKNEGKSSEDIISTLRNGSAAESAVAKMHEKGLLVPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILDLAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRSSFRKDPADADSILSEARKKIQIFENGFLAGEDADDVEREEDSESDEVDEDPEADELVNPSSVIRNSEQCEDTNICSSHVTESLAHDVGLIENVFDRDLPCFPENGSKDANCPTSVSRQCLACEDLNTENLDQDNMEIDESKSGESWVQGLAEGEYSDLTIEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKIRLKDDSINKLDFPSLIRNKVETEYTYPAVEGNQSPLLDINIRNINNEASPSTTENQKATPVAHRLPVERSSSAKDLCPGTGPDNPQTQVPAPYSKRSRSQLKSYISRMAEEMYVYRSLPLGQDRRRNRYWLFAASASSNDPGSGRIFVECHDDGIWRLIDSEEVFDVLLKSLDSRGIRESHLRLLLKKIENSFKENVRRNTNCVKIECPSSTLHSLNSETSEISPSIKIELGKSEREKISALRRYQDFQKWMWKECYKSSILCAMKSGIKRCKPHVDICDICFNPYFVEDSHCNSCHQTFPANNGFNFSKHAFQCEQKLSKDVCISESPLPLRTRLLKFLLACIEVSVLPEAFGTIWTDELRKHWGMKLSKSSSVVELLQILSLFERALRREFLSSNFATTDELLGFSSMSESAHASTDPESVAVLPWVPQTTAALSLRLFEIDSSISYVKPVKPEHHEEKEAREYIKLPSRYTPFKFKKEVEPAELDHDEFIIDKSVPKKVVRSGNKRGRGSNDQGRGKKLSKRPYNSKRDIGCRNDKVNENLSLKLKQQQGRGTRGQAGGRGRRTVRKRRVEKRAIEDLLLGNMDAGHSFQVSRVPLRSIDEEWEAEKASPITTVHMDVADNSNSTEEVESDDNGRAAECDRGNWEIGFNGIPHGRWGNDLVGMSDEDVNASEDGNGNGIEEEDSEADVMNEGSDGMANRVVVNEEDSDFAVSEDSSDY 1725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0207 1725 Coils Coil 372 437 - -
Lal11g0207 1725 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 939 982 IPR028942 -
Lal11g0207 1725 Pfam Homeodomain 39 95 IPR001356 GO:0003677
Lal11g0207 1725 MobiDBLite consensus disorder prediction 1 48 - -
Lal11g0207 1725 ProSiteProfiles HARE-type HTH domain profile. 729 798 IPR007759 GO:0006355
Lal11g0207 1725 Coils Coil 440 474 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 1074 1100 - -
Lal11g0207 1725 CDD homeodomain 39 97 IPR001356 GO:0003677
Lal11g0207 1725 SMART testlast3 547 606 IPR018501 -
Lal11g0207 1725 ProSiteProfiles 'Homeobox' domain profile. 36 96 IPR001356 GO:0003677
Lal11g0207 1725 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 1724 IPR044977 GO:0006357
Lal11g0207 1725 SUPERFAMILY Homeodomain-like 25 96 IPR009057 -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 828 860 - -
Lal11g0207 1725 SMART HOX_1 38 100 IPR001356 GO:0003677
Lal11g0207 1725 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1120 1193 IPR028941 -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 287 307 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 1671 1701 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 1515 1542 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 1506 1574 - -
Lal11g0207 1725 ProSiteProfiles DDT domain profile. 547 606 IPR018501 -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 830 852 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 20 44 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 386 432 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 108 142 - -
Lal11g0207 1725 PANTHER HOMEOBOX DOMAIN PROTEIN 7 1724 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 1 19 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 292 306 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 336 372 - -
Lal11g0207 1725 MobiDBLite consensus disorder prediction 1085 1100 - -
Lal11g0207 1725 Pfam HB1, ASXL, restriction endonuclease HTH domain 729 797 IPR007759 GO:0006355
Lal11g0207 1725 MobiDBLite consensus disorder prediction 353 372 - -
Lal11g0207 1725 Pfam DDT domain 549 603 IPR018501 -
Lal11g0207 1725 Gene3D - 22 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0207 Lal-Chr11 1479822 1489647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0207 1 1656 Homeobox Transcription Factor Family AT1G28420 47.205 0.0 1263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lal11g0207 WSD 1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0207 - - gmx:100777465 2438.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0207 11 1479822 1489647 Lal11g0207 11 1479822 1489647 ECH
Lal5g1716 5 19283763 19294601 Lal11g0207 11 1479822 1489647 LSH
Lal3g0097 3 586951 597782 Lal11g0207 11 1479822 1489647 LSH
Lal15g0643 15 4406389 4417132 Lal11g0207 11 1479822 1489647 PCT
Lal11g0207 11 1479822 1489647 Lal15g0643 15 4406389 4417132 PCT