Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0198 ATGGATGGAAATTGGGCTGAGGGAAAGAAGACATTGGAGTATGAAGATGAAGAAGAGGAAGAGGAAGTGGTGAGTGAGATGATGAGTTATGGAGAAGAAAGAATGAATAAGAAGAGGGTAGTGAGCACAGATCTCTATAGTAGCAAAAGAGGGTCTAAAGCTGGAGGGTCAATGCCACCTTCTTGTCAAGTAGATAGTTGCAAAACTGATCTAAGTGAAGCAAAGCATTATCACAGGAGGCACAAGGTTTGTGAGTATCATGCAAAAGCTCCTTCTGTGCTCATAGCAGATGAACAGCAAAGGTTTTGCCAGCAATGTAGCAGTACCAAAAAAAACATTACTCTGATTTACATGAAGTTGACAACACAAAATACAATCTCCATCGATATGGCAAATCAGGAGTTCCATGAGGTGTCAGAATTTGATGAGTCAAAAAGAAGTTGTAGAAGGCGTTTGGCTGGACATAATGAGAGGCGTCGCAAAACTACAGCTGATTATAATGGAGAAGGATTTCATTGA 519 0.4066 MDGNWAEGKKTLEYEDEEEEEEVVSEMMSYGEERMNKKRVVSTDLYSSKRGSKAGGSMPPSCQVDSCKTDLSEAKHYHRRHKVCEYHAKAPSVLIADEQQRFCQQCSSTKKNITLIYMKLTTQNTISIDMANQEFHEVSEFDESKRSCRRRLAGHNERRRKTTADYNGEGFH 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0198 172 SUPERFAMILY SBT domain 134 166 IPR036893 GO:0003677|GO:0005634
Lal11g0198 172 MobiDBLite consensus disorder prediction 1 63 - -
Lal11g0198 172 ProSiteProfiles Zinc finger SBP-type profile. 59 162 IPR004333 GO:0003677
Lal11g0198 172 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 42 167 IPR044817 GO:0003677
Lal11g0198 172 MobiDBLite consensus disorder prediction 152 172 - -
Lal11g0198 172 Gene3D - 52 149 IPR036893 GO:0003677|GO:0005634
Lal11g0198 172 SUPERFAMILY SBT domain 60 109 IPR036893 GO:0003677|GO:0005634
Lal11g0198 172 MobiDBLite consensus disorder prediction 27 44 - -
Lal11g0198 172 Pfam SBP domain 62 109 IPR004333 GO:0003677
Lal11g0198 172 Pfam SBP domain 133 161 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0198 Lal-Chr11 1407145 1409370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0198 62 165 SBP-box Gene Family AT2G33810 54.808 2.63e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lal11g0198 SBP 4.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0198 - - lang:109329071 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0198 11 1407145 1409370 Lal11g0198 11 1407145 1409370 ECH
Lal9g0521 9 3491014 3492461 Lal11g0198 11 1407145 1409370 ECH
Lal2g0588 2 3530057 3530816 Lal11g0198 11 1407145 1409370 ECH
Lal5g1723 5 19348663 19351775 Lal11g0198 11 1407145 1409370 LSH