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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal11g0194
ATGAAGTTCAACATTGCAAATCCCACCACTGGATGCCAGAAGAAGCTGGAGATCGATGATGACCTCAAGCTCCGAGCATTCTGGGACAAGAGGATCTCACAAGAGGTTCTTGGCGATGCTCTTGGCGAGGAATTCAAAGGCTATGTCTTCAAAATCACTGGAGGGTGTGACAAACAAGGGTTTCCAATGAAGCAGGGAGTGTTGACCCCTGGTCGTGTTCGTCTCTTGCTCTACAGAGGAACTCCTTGTTTCCGTGGATATGGAAGACGCAATGGAGAGCGTAGGAGAAAGTCTGTACGTGGGTGCATTGTTAGTCCAGATCTCTCTGTTCTGAACTTGGTGATTGTGAAGAAGGGTGACAATGATTTACCAGGCTTGACAGACATTGAAAAGCCAAGAATGAGGGGTCCTAAAAGAGCATCCAAAATCCGTAAGCTGTTTAACCTGTCCAAGGAAGATGATGTGAGGAAGTATGTCAACACATATCGGCGAACATTCACAACCAAAAATGGGAAAAAGGTGAGCAAAGCTCCAAAGATACAACGACTGGTCACTCCTCTGACACTTCAAAGAAAGAGGGCAAGAATTGCAGATAAGAAGAAGAGAATTGCGAAAGCAAAATCAGATGCAGCAGAGTACCAGAAACTTCTGGCCTCCAGATTGAAGGAGCAGAGAGAACGCCGCAGTGAGAGTCTGGCCAAGAAGAGATCAAGGCTGTCTAGTGCTACCAAGCAACCTGCCACAGCATAG
750
0.468
MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSDAAEYQKLLASRLKEQRERRSESLAKKRSRLSSATKQPATA
249
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal11g0194
249
PANTHER
40S RIBOSOMAL PROTEIN S6
1
246
-
-
Lal11g0194
249
SMART
Ribosomal_S6e_2
1
128
IPR001377
GO:0003735|GO:0005840|GO:0006412
Lal11g0194
249
MobiDBLite
consensus disorder prediction
220
249
-
-
Lal11g0194
249
Coils
Coil
189
216
-
-
Lal11g0194
249
Pfam
Ribosomal protein S6e
1
128
IPR001377
GO:0003735|GO:0005840|GO:0006412
Lal11g0194
249
Gene3D
-
133
234
-
-
Lal11g0194
249
PANTHER
40S RIBOSOMAL PROTEIN S6
1
246
IPR001377
GO:0003735|GO:0005840|GO:0006412
Lal11g0194
249
PIRSF
RPS6e
1
249
IPR014401
GO:0003735|GO:0005840|GO:0006412
Lal11g0194
249
ProSitePatterns
Ribosomal protein S6e signature.
52
63
IPR018282
GO:0003735|GO:0005840|GO:0006412
Lal11g0194
249
MobiDBLite
consensus disorder prediction
220
237
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal11g0194
Lal-Chr11
1377466
1380371
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal11g0194
1
249
Cytoplasmic Ribosomal Protein Gene Family
AT5G10360
72.289
3.01e-120
339
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal11g0194
K02991
-
gmx:100801194
442.58
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lal5g1725
5
19362857
19365225
Lal11g0194
11
1377466
1380371
LSH
Lal16g0678
16
4389522
4391749
Lal11g0194
11
1377466
1380371
PCT
Lal15g0631
15
4352762
4355376
Lal11g0194
11
1377466
1380371
PCT
Lal23g0941
23
11520722
11523536
Lal11g0194
11
1377466
1380371
PCT
Lal11g0194
11
1377466
1380371
Lal16g0678
16
4389522
4391749
PCT
Lal11g0194
11
1377466
1380371
Lal15g0631
15
4352762
4355376
PCT
Lal11g0194
11
1377466
1380371
Lal23g0941
23
11520722
11523536
PCT
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