Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0187 TTCCAATCCAAGTACCTAGCAATAAGAAGGTATAACCATCCTTCTCTTCTTATAGCATCTAATTTACCTATTGCATCCTGCAGCTGGAACGTTATGGAGAACAACCAAAATTCTGCAACCAAAACTGATAGAAAATTCATTGAGAGAAATAGAAGAAGTAAAATGAAGGCTCTCTCTTGCATGCTTAACTCAATTGTGCCTCAACAAAGCTCAAGGGAGCCTTTTTCACTGTCAGATCAATTACAAGAAGCCACGAACTACATAAAAATGCTAGAGATGAAACTGGAGGAAATGAAGGACAAAAGGAATAGGCTACTAGAAATTCAAAGAGAAAATATGAGGATGAATAGAGGAAGGTCAAAATCTCCAAAAATAGAGATCCAACAAATGGGTTTAGCCTTAGTGGTTGGTTTAGTAACTGGGTTGGAATTTCAGTTCATGTTCAAAGAGTGCATCCGTTTTCTTCTTGAAGAAAGAGCAGATATTATTAGTGCCAATTATATAGTTTCTGGAGATTCATTTTTCCACACAATACACTGCCAGGTAGAGGAATCTTCCAATGGAGCAAGGATATCTGAGAGATTGAAGATGTTTGTCTATGATTCTTGTGCCTTTTATTAA 621 0.3671 FQSKYLAIRRYNHPSLLIASNLPIASCSWNVMENNQNSATKTDRKFIERNRRSKMKALSCMLNSIVPQQSSREPFSLSDQLQEATNYIKMLEMKLEEMKDKRNRLLEIQRENMRMNRGRSKSPKIEIQQMGLALVVGLVTGLEFQFMFKECIRFLLEERADIISANYIVSGDSFFHTIHCQVEESSNGARISERLKMFVYDSCAFY 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0187 206 Gene3D - 31 121 IPR036638 GO:0046983
Lal11g0187 206 Coils Coil 81 111 - -
Lal11g0187 206 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 35 200 IPR015660 GO:0003700|GO:0006357
Lal11g0187 206 PANTHER TRANSCRIPTION FACTOR BHLH162 35 200 - -
Lal11g0187 206 Pfam Helix-loop-helix DNA-binding domain 44 92 IPR011598 GO:0046983
Lal11g0187 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 39 108 IPR036638 GO:0046983
Lal11g0187 206 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 39 91 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0187 34 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 43.094 9.88e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal11g0187 HLH 2.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0187 - - lang:109345606 236.498