Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0186 ATGAATGAAGATACTAATTCTTGGATAAGGAGGACAAATTTCTCTCACACTGTGTGTCATAGATTGGATCCTTCTAGATTGAATTCTCTTCCTATTAGCATTCAACCAGAGCATAGTCCAGGTCTGAAATCAAGGCCTTATGGCAATACTATTTCTAATGGTTTACATGTTCAAAGGAATCCCATTTTAAACACGCGATCTGTATCCCCTTTGCCTGAAACTCTTGTTTCCGAGACCTTTAAAGAAGCTCGACATGAACAGAAGAGGTTCTCTACACCGGGTCCTCGAAGGAATGGTAATGGTAATGATAATAAGAGAATTATGGGGAAGTTATCAAACAAGGATTCACGAGAAAGTCGGATATCGAGTGCAAAATCACCTTCCATTAGTCCAATTAGGCAAGTGAAATTGAATGACAAGTCATTGAAGCATCACAAAGATGGATGGGCTAAGTATTTTGACCATGGTGTAGGAAGGGTTACTGCTGTGGAAACAGCTGATGATTGGACTGTTGATCTCTCAAAGCTATTTATTGGCCTTAGGTTTGCTCATGGGGCTCATAGTCGGCTTTACCACGGTGTATATAAGGAAGAGCCGGTTGCTGTGAAAATTATTCGGGTACCTGATGATGACGACAATGGAACCTTAGCTTCTAGATTAGAGAACCAATTCATTAGGGAAATCACACTTTTATCTCGACTCTACCATCCAAATGTTATAAAGTTTGTAGCAGCTTGCCGAAATCCACCAGTCTATTGTATCATTACGGAGTATCTAGCGGAAGGTTCCTTGAGGGCATATTTGCATAAGTTGGAGCGGAAAACAGTTTCTCCACAAAAGCTTATATCTTTCGCTCTGGATATTGCCCGGGGAATGGAATATATACACTCTCAAGGTATCATTCATCGAGACCTTAAACCAGAGAATGTTCTCATCAATGAAGATTCTCACCTTAAAATTGCTGATTTTGGCATTGCTTGTGAGGAGGCATTTTGTGACTTATTGGCTGATGACCCTGGTACATATCGTTGGATGGCACCTGAGATGATCAAGCGTAAATCCTACGGGAAAAAGGTTGATGTCTATAGTTTCGGACTTATGTTATGGGAAATGGTGACCGGAACAATACCATATGAAGATATGACTCCGATCCAGGCGGCTTTTGCAGTAGTAAACAAGAACTCAAGACCGGTTATTCCGATGAACTGCCCCGTCGCAATGAGAGCTTTAATTGAGCAATGTTGGTCCTTGCAACCGAATAAGAGGCCGGAGTTCTGGCAGGTTGTTAAGGTTTTAGAGCAATTTCAATCTTCGCTTTCCCGTGATGGAACCCTCACTTTGGTACAAAACCCTTGCCAAGACCATAACAAAGGCCTTCGGCATTGGATTCAGAAGCTTCGCCCCCTGCATCAAAATAATGGCCCTGTTCTTAAGCCTAAATTTATATGA 1449 0.4175 MNEDTNSWIRRTNFSHTVCHRLDPSRLNSLPISIQPEHSPGLKSRPYGNTISNGLHVQRNPILNTRSVSPLPETLVSETFKEARHEQKRFSTPGPRRNGNGNDNKRIMGKLSNKDSRESRISSAKSPSISPIRQVKLNDKSLKHHKDGWAKYFDHGVGRVTAVETADDWTVDLSKLFIGLRFAHGAHSRLYHGVYKEEPVAVKIIRVPDDDDNGTLASRLENQFIREITLLSRLYHPNVIKFVAACRNPPVYCIITEYLAEGSLRAYLHKLERKTVSPQKLISFALDIARGMEYIHSQGIIHRDLKPENVLINEDSHLKIADFGIACEEAFCDLLADDPGTYRWMAPEMIKRKSYGKKVDVYSFGLMLWEMVTGTIPYEDMTPIQAAFAVVNKNSRPVIPMNCPVAMRALIEQCWSLQPNKRPEFWQVVKVLEQFQSSLSRDGTLTLVQNPCQDHNKGLRHWIQKLRPLHQNNGPVLKPKFI 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0186 482 CDD STKc_MAP3K-like 183 432 - -
Lal11g0186 482 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 459 - -
Lal11g0186 482 Pfam Protein tyrosine and serine/threonine kinase 182 432 IPR001245 GO:0004672|GO:0006468
Lal11g0186 482 Gene3D Transferase(Phosphotransferase) domain 1 260 465 - -
Lal11g0186 482 SUPERFAMILY Protein kinase-like (PK-like) 160 432 IPR011009 -
Lal11g0186 482 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 459 - -
Lal11g0186 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Lal11g0186 482 PRINTS Tyrosine kinase catalytic domain signature 256 269 IPR001245 GO:0004672|GO:0006468
Lal11g0186 482 PRINTS Tyrosine kinase catalytic domain signature 294 312 IPR001245 GO:0004672|GO:0006468
Lal11g0186 482 PRINTS Tyrosine kinase catalytic domain signature 340 350 IPR001245 GO:0004672|GO:0006468
Lal11g0186 482 PRINTS Tyrosine kinase catalytic domain signature 359 381 IPR001245 GO:0004672|GO:0006468
Lal11g0186 482 PRINTS Tyrosine kinase catalytic domain signature 403 425 IPR001245 GO:0004672|GO:0006468
Lal11g0186 482 ProSiteProfiles Protein kinase domain profile. 176 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0186 482 Gene3D Phosphorylase Kinase; domain 1 164 259 - -
Lal11g0186 482 SMART serkin_6 176 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0186 482 MobiDBLite consensus disorder prediction 81 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0186 Lal-Chr11 1301889 1305106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0186 1 470 MAP Kinase Kinase Kinase AT5G58950 57.510 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal11g0186 PK_Tyr_Ser-Thr 5.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0186 - - gmx:100500590 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0088 3 523752 527485 Lal11g0186 11 1301889 1305106 LSH
Lal16g0677 16 4384979 4388394 Lal11g0186 11 1301889 1305106 PCT
Lal23g0945 23 11536579 11541238 Lal11g0186 11 1301889 1305106 PCT
Lal11g0186 11 1301889 1305106 Lal16g0677 16 4384979 4388394 PCT
Lal11g0186 11 1301889 1305106 Lal23g0945 23 11536579 11541238 PCT