Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0133 ATGAAGAAGTGTGAACTATGTAACAGTCCAGCAAAGTTGTTCTGTGAATCAGATCAAGCTACCCTCTGTTGGGAATGTGATGCAAAGGTTCACACTGCAAACTTTCTTGTCACCAAACATCAAAGGTTTCTTCTTTGCCATGTTTGTCAATCACTCACACCTTGGCATGGCTCTGGTCCCAAGTTTGTACCCACCATTTCTTTTTGTAATGACTGTGTCAGAAACAATAACCAAGAGAATGATCATGATGATGATCAAGATGAAGATGAAGATGATGATGATATAGAAAATGATGAAGATGAAGAAGAAAATCAAGTGGTTCCATGGACAAGTACACCTCCACCACCAGTTTCAAGCTCTTCAAATAGTGCAACTAGTTCTTCAATGTTATCTAATGGTGAAGAAGGAGCCTCAGATTAA 420 0.3905 MKKCELCNSPAKLFCESDQATLCWECDAKVHTANFLVTKHQRFLLCHVCQSLTPWHGSGPKFVPTISFCNDCVRNNNQENDHDDDQDEDEDDDDIENDEDEEENQVVPWTSTPPPPVSSSSNSATSSSMLSNGEEGASD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0133 139 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 132 - -
Lal11g0133 139 Pfam B-box zinc finger 2 41 IPR000315 GO:0008270
Lal11g0133 139 MobiDBLite consensus disorder prediction 77 139 - -
Lal11g0133 139 MobiDBLite consensus disorder prediction 82 105 - -
Lal11g0133 139 CDD Bbox1_BBX-like 3 45 - -
Lal11g0133 139 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 132 - -
Lal11g0133 139 SMART bboxneu5 1 45 IPR000315 GO:0008270
Lal11g0133 139 MobiDBLite consensus disorder prediction 116 139 - -
Lal11g0133 139 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0133 Lal-Chr11 882326 882745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0133 2 104 C2C2-CO-like Transcription Factor Family AT4G27310 49.038 6.01e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal11g0133 zf-B_box 4.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0133 - - ccaj:109788364 162.925