Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0129 ATGATCACTACACACCAATATATTCTCTGTTTTTTCCTCTGTTTCAATACTCTGTTTTCACGTGCAGCCACTTCCAATATCACACAAGGTGAATTCATAAGAGATGGTGAAACTCTTATATCAGATAAACTCAACTTTCAAATGGGTTTCTTCACTCCAAATAACAACAACAATTCATCTTATTCACGTTACGTTGGGATTTGGTATTACAACATTCCTCAACCACAATTTGTTTGGGTTGCAAATAGAGACAAACCCATTCATGGTAGAGGAGGTGCTATAACTATAACAAGTAATGGTAACTTAGTTATATTTGATGACAAAAATACACTATTATGGTCTACCAATGTTTCATTTTCAATGGAAAACTCACAAGCTGTGCTTCATGATGATGGAAATCTTATCCTTTCAAGTAAAGGTGATAATGGTAAGAAAGTAGTTTTATGGACAAGTTTTGATAACCCAACTGATACATTTTTACCTGGTATGAGAGTTCCAGTGAGTGGTGTACAAGTGAAGAAGAATAAAAAGAACTATGCTTTTACATCATGGAAATCTAGTACTGATCCTTCACTAGGGAACTATTCAATGGGGGTTGATCCTGAGAAGTTACCTCAGATAGTGGTTTGGGAAGGAGGGAAGAGAAAGTGGAGAAGTGGTTATTGGGATGGTAGAATATTCACTGGTGTGAATATGACAGGAAGTTTTTTATATGGTTTTACACTTAATGTGGATACTCAAGGTGGTAAATATTTTGTGTATAGTCCATTGAATAGTGGTGATAAGGTGAGGTTTCAGATAGGGTTTGATGGATATGAAAGAGAGTTCAAATGGAGTGAAAACGAGAAGAAATGGAATCAGATGCAAATAGGTCCTTTTAATGAGTGTGAGGTTTATAACAAGTGTGGTAGTTTTGCAGCATGTGATATATCAACTTCACCTATGTGTAGTTGCATAAAGGGGTTTGAGCCAAAGCATAGGGATGAGTGGAGTAATTTGAATTGGTCTAGTGGGTGTAAGAGGATAACTCCACTGAAGGATGAGATAAGTAATAGTTATGGAAGAGAGGTGAATGTTGGAGAAGATGGTTTTTTGGAACTTAGGGGTATGAAGTTGCCAGATTTTGCGCGTTTGGTCAATGTCAATAATCCTAATGGCATGGAAGATTGTAGGAGAAATTGCTTGAGGAATAGTTCTTGTATTGCATATGCAAATGTTATTGGAATTGGCTGCATGGTTTGGGATGAAGAGTTAGTTGATGTTCAGCACTATGAAATTGGAGGAAATACACTGCATATCCTCCTTGCTAATTCTGATTTAGATACAGGCAATGGTGGAAAAAAGAAGATTTTGATATTATCATCTGTTCTGCTAGGGTCAATCTGTTTAGGAATCTTTGTGTTGCTTCTATGGAGGTTCAAAAGAAAACTCAAAGATTTGCCTACAGTTTCCTCAGCTTCATGTCGCAAGGATAGTGATGCTGATATACCATTCTATGATGTGAGAATGAGTAGAGACTTGTCAACTGAACTTTCGGGATCAGCCGACCTTGGCTTGGTAGGGAATGAACTAAGTCGACCAGAACTTCCACTTTTCTATTTTAGTTACATTTCAAAAGCCACAAACAATTTCTCAGAAGAAAATAAGCTTGGGCAAGGGGGCTTTGGTCCTGTCTACAAGGGAGAGCTTCCAAGTGGAGAACAAATAGCTGTCAAGAGGCTATCAAAACGATCCGGCCAAGGTTTGGAGGAGTTCAAGAATGAAATGATGCTCATTGCCAAACTACAACATAGAAATTTAGTTAGACTAATAGGTTGTTCTATTCAAGGGGAAGAAAAGTTGCTTGTGTATGAGTATATGCCAAACAAAAGCTTGGACTGCTTTTTATTTGATCCAATGAAGCAAATACAACTAGATTGGACAAGACGCTTAGAAATCATCGAAGGCATTGCAAGAGGGCTACTTTATCTGCATCGCGATTCAAGGCTCAGAATAATTCATCGAGATCTAAAAGCAGGCAACATTTTGTTGGACCAAAACATGAACCCAAAAATCTCAGACTTTGGCTTGGCTAGGATATTTGGTGGAAACCAGAATGAAGCTAATACAACCAGAGTGGTTGGTACATATGGCTATATGTCTCCTGAATATGCAATGGAAGGTCTATTCTCAGTCAAATCTGACGTGTATAGTTTTGGAGTATTACTGCTAGAAATAGTAAGTGGCCGCAGGAACACTAGCTTCCGCAACTCAAATGACTCAAGTCTCATAGAATATGCTTGGCATCTTTGGAGTGAACAAAGAGCAATGGAGCTTATTGATCCTTGTATTCGCGATTCTAGTCCTAAACTTCAAGCTTTGAGATGCATACACATAGGGATGTTATGTGTGCAAGACTCAGCAGCTCATAGACCAAACATGTCCACTGTGATGTTGATGCTGGAAAGTGAATCAACAGCTCTTACCATGCCTAGACAACCTTTGATTACTTCCATGAGAATATCTCAGGAAAGAGAATTTCATATGGATGCCCTTGATGATTCAAATGATTTGACAGTCACAATGGTTGTAGGGAGATAG 2580 0.3829 MITTHQYILCFFLCFNTLFSRAATSNITQGEFIRDGETLISDKLNFQMGFFTPNNNNNSSYSRYVGIWYYNIPQPQFVWVANRDKPIHGRGGAITITSNGNLVIFDDKNTLLWSTNVSFSMENSQAVLHDDGNLILSSKGDNGKKVVLWTSFDNPTDTFLPGMRVPVSGVQVKKNKKNYAFTSWKSSTDPSLGNYSMGVDPEKLPQIVVWEGGKRKWRSGYWDGRIFTGVNMTGSFLYGFTLNVDTQGGKYFVYSPLNSGDKVRFQIGFDGYEREFKWSENEKKWNQMQIGPFNECEVYNKCGSFAACDISTSPMCSCIKGFEPKHRDEWSNLNWSSGCKRITPLKDEISNSYGREVNVGEDGFLELRGMKLPDFARLVNVNNPNGMEDCRRNCLRNSSCIAYANVIGIGCMVWDEELVDVQHYEIGGNTLHILLANSDLDTGNGGKKKILILSSVLLGSICLGIFVLLLWRFKRKLKDLPTVSSASCRKDSDADIPFYDVRMSRDLSTELSGSADLGLVGNELSRPELPLFYFSYISKATNNFSEENKLGQGGFGPVYKGELPSGEQIAVKRLSKRSGQGLEEFKNEMMLIAKLQHRNLVRLIGCSIQGEEKLLVYEYMPNKSLDCFLFDPMKQIQLDWTRRLEIIEGIARGLLYLHRDSRLRIIHRDLKAGNILLDQNMNPKISDFGLARIFGGNQNEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRRNTSFRNSNDSSLIEYAWHLWSEQRAMELIDPCIRDSSPKLQALRCIHIGMLCVQDSAAHRPNMSTVMLMLESESTALTMPRQPLITSMRISQEREFHMDALDDSNDLTVTMVVGR 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0129 859 Pfam PAN-like domain 360 421 IPR003609 -
Lal11g0129 859 PIRSF SRK 1 859 IPR024171 GO:0004674
Lal11g0129 859 Gene3D Transferase(Phosphotransferase) domain 1 620 827 - -
Lal11g0129 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Lal11g0129 859 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 190 IPR036426 -
Lal11g0129 859 CDD B_lectin 31 155 IPR001480 -
Lal11g0129 859 SUPERFAMILY Protein kinase-like (PK-like) 528 841 IPR011009 -
Lal11g0129 859 Pfam D-mannose binding lectin 77 185 IPR001480 -
Lal11g0129 859 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 9 859 - -
Lal11g0129 859 SMART blect_4 30 155 IPR001480 -
Lal11g0129 859 SMART ntp_6 359 435 IPR003609 -
Lal11g0129 859 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 9 859 - -
Lal11g0129 859 ProSiteProfiles Protein kinase domain profile. 544 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0129 859 Gene3D Phosphorylase Kinase; domain 1 518 619 - -
Lal11g0129 859 ProSiteProfiles Bulb-type lectin domain profile. 24 149 IPR001480 -
Lal11g0129 859 Pfam Protein tyrosine and serine/threonine kinase 547 811 IPR001245 GO:0004672|GO:0006468
Lal11g0129 859 SMART serkin_6 544 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0129 859 CDD STKc_IRAK 550 815 - -
Lal11g0129 859 CDD PAN_AP_plant 358 436 - -
Lal11g0129 859 Pfam S-locus glycoprotein domain 217 325 IPR000858 GO:0048544
Lal11g0129 859 ProSiteProfiles PAN/Apple domain profile. 359 439 IPR003609 -
Lal11g0129 859 Gene3D - 18 152 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0129 Lal-Chr11 855306 859327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0129 514 827 Receptor kinase-like Gene Family AT4G23140 59.190 1.95e-131 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal11g0129 PK_Tyr_Ser-Thr 6.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0129 - - aprc:113869342 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0640 16 4085610 4089929 Lal11g0129 11 855306 859327 PCT