Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0123 ATGGCTGAGGAATTTCTTAAAGCTGGAATTTGTGGTGAAAACTGGTGGAATATGAATTCATCAAGAAGTGTGTACCCTCTTATGAACTCATCATCATCAACATGTTCAGTGGCTGCTAATGATGCAGGGAACTATAACACATGGCAAAATGATTTCTTGGATTTGAAGTCAACAAGGTCATGTTATGAGAACACAAATAATAGTTATTTTGTTTCTGATGCTTGTCTTGGTTTTCTTGAAGCTCATAAGCCACAGCAGAGTGATTCAGCAGCTAGTGAAAGTGGTAGCATCTTCATTGATATGGGTTTTGGCTTGTCTTCATCAACTTCATTGAATTGGAACCAGTCTCTATTTGGTCATTGTAGTGAAAAGCCAGAGAGCAATTTTGATTATGTGGTTCAAGAAGAAACTGGTTTACATTCTTCAAATGATTTACAAAGCCAAAAGGGTTGGAGTCCAAATAAATCAGAATCACCAGTTAATGCCTTGAAGCCAATGAATCAAGAACTTTGCTTAGATGAACAAGGTCTGAATTCTATAACTAGCACTGGCTTATCATGTGGTTTCCCAATAGGGTCAACACCCTCCTATGATTACCCTACAAATTTGATACAAAGCTTATATGACCCTTCTGCTCCACAACCACAACCAGGGAACTCACTTTTCACCAACCCTTCTACTATGTCCTATTCATCCTCCAACACACTTTCACCAACAACATGGTCTAAAGTCCCTAATTCCCCTATGCCAAAGCAGCAGCAACAGCATCTTAGTGGTGAATTGCACTTTTCCAATAATACTCCTTTGTGGAATGTTTCAGCTGAGGCACTAAATGACATAAGAGCAGGTGTTTTTGCTTCATCACAAGCACAATATCAAATACCAACTTTTGAAGAGAAACCCATTTCCCCAAGTACTCTATTAAACAAGGTGAAGAAAGATGAATCTCAAGACACAGCATCAATGGGGAAGAAAAGTGGTTGTGAACCAGCATTCAAGAGGCAAAGAATTGAAACTCCATCACCATTGCCTACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGTATCACTGCACTTCAGCAATTGGTTTCACCTTTCGGAAAGACAGACACAGCCTCCGTTCTTCACGAAGCCATCGACTACATCAAGTTCCTTCATGATCAAGTTACTGTTTTCAACACTTCATATCTAAAAAACGGAGCTCTCATTCAGCAGCAGCAACAGAGATGTGATAATCTGAATGATTCAGAAGGTCCAAAAGAAGATTTAAGAAGTAGAGGGCTATGCTTGGTTCCAATTTCAAGCACATTCCCAGTAGTTAATGAAACAAGTGTTGATTTCTGGACTCCAACATTTGGAGGCGCATTCATCAGCAGCTAA 1383 0.3977 MAEEFLKAGICGENWWNMNSSRSVYPLMNSSSSTCSVAANDAGNYNTWQNDFLDLKSTRSCYENTNNSYFVSDACLGFLEAHKPQQSDSAASESGSIFIDMGFGLSSSTSLNWNQSLFGHCSEKPESNFDYVVQEETGLHSSNDLQSQKGWSPNKSESPVNALKPMNQELCLDEQGLNSITSTGLSCGFPIGSTPSYDYPTNLIQSLYDPSAPQPQPGNSLFTNPSTMSYSSSNTLSPTTWSKVPNSPMPKQQQQHLSGELHFSNNTPLWNVSAEALNDIRAGVFASSQAQYQIPTFEEKPISPSTLLNKVKKDESQDTASMGKKSGCEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIDYIKFLHDQVTVFNTSYLKNGALIQQQQQRCDNLNDSEGPKEDLRSRGLCLVPISSTFPVVNETSVDFWTPTFGGAFISS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0123 460 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Lal11g0123 460 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 400 IPR036638 GO:0046983
Lal11g0123 460 MobiDBLite consensus disorder prediction 209 252 - -
Lal11g0123 460 Gene3D - 347 416 IPR036638 GO:0046983
Lal11g0123 460 PANTHER TRANSCRIPTION FACTOR BHLH123 36 448 - -
Lal11g0123 460 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 448 - -
Lal11g0123 460 MobiDBLite consensus disorder prediction 139 160 - -
Lal11g0123 460 CDD bHLH_AtbHLH_like 343 392 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0123 Lal-Chr11 821733 825634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0123 1 455 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.209 1.33e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0123 - - lang:109333637 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0123 11 821733 825634 Lal11g0123 11 821733 825634 ECH
Lal5g1776 5 19730298 19734031 Lal11g0123 11 821733 825634 LSH