Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0115 ATGGCACAGAAACAGAAACGTCCTTCCCCTCACGATGTTCCACCATCCGTTTCTTCCGATGATGAACCAATCCCTTCTTCTCAACCTGATTCTGATAAAGAAGAAGAAAAAGTAGAATCTTCTTCTGAAGAAGATGAGAAAAAAACTCAATCTCAATCCAAAAACCCTAAATCCCCCTCTTCCCCTGAATCCGTTACCGATTCCGATTCAAGTTCCGATTCTGAATCTGAATCTGAATCACATGGTGTTTCCAATTACCAAATCCAACCCAAACCCCTTGCTTCGAAGCCATTGGATGAAACTCCTATCAAGTCCAATTCCAAATCGTTGAAGCGCCCTGTGGAGGAGAGTAACGGTAGTGGTGATGTGAATCGTGCTAAGAAGAAAAAAGTAACAGATGCTTCTTCAGATTCTAGCGATGATGATGATGATGATGATGATGATGGAAAAGTTGAAGCTGCTGAAGTTAAGAAATCATCTGGTGTTGCTTCTGATTCTAAGAGTCTTCCTTTTCAGAGATTGTTTAGTGAGGAAGATGAGATTGCTATACTCGATGGAATGATTGATTTCAAGAAAAAAACTGGGAATGATCCTTTAAGATTTGTTAATTTTTTTCACCGTTTCGTTAGTAAATCGCTTCATATTGATGCGTCGAGTAACCAGTTGAAGGATAAGATTCAGAGGCTGAGGAGGAAGTTCATGGCCAATGTTAAAGGGAAGAGTTTTTCTAAACGCCACGACGAAATAGCATTTGAATTGTCTAAGAAGATTTGGGGCAATGCTGGTGGTGCTAATGAAGTAGTGGAGAAAGCAAAGTCTAATGGAAAAGCTTCGGAAATCGCGAAGAAGGAAGGTAGCAGAGGGAATGAGGTTCTTTTGAAATCAAAACCTGAACCGAAACAGGAGGTGAAATTATTAATGTATTCGAAGGATTCGAAGGAGGAAGCTCTGAATAAAGAAACCGGTGAGAAGACTGATTTTCCTTTGAGTATAGCGCAAGGTTTTGGTTTGTATGGGCTGAATGAGAATATGATGAAGAAGGGTTTGGATTTAATGGGATCATCAGACAGGGCAAAATTGGAGAAACAATGGAAGGAGCTCGAAGCTGCAGAATTTGAGGCCAATGTGAAACGTATAGAACTAGTTGCGAAACAGTCTAGGTTGATATTGGAGGCATACGCTGCATCAAATCATTAG 1197 0.4043 MAQKQKRPSPHDVPPSVSSDDEPIPSSQPDSDKEEEKVESSSEEDEKKTQSQSKNPKSPSSPESVTDSDSSSDSESESESHGVSNYQIQPKPLASKPLDETPIKSNSKSLKRPVEESNGSGDVNRAKKKKVTDASSDSSDDDDDDDDDGKVEAAEVKKSSGVASDSKSLPFQRLFSEEDEIAILDGMIDFKKKTGNDPLRFVNFFHRFVSKSLHIDASSNQLKDKIQRLRRKFMANVKGKSFSKRHDEIAFELSKKIWGNAGGANEVVEKAKSNGKASEIAKKEGSRGNEVLLKSKPEPKQEVKLLMYSKDSKEEALNKETGEKTDFPLSIAQGFGLYGLNENMMKKGLDLMGSSDRAKLEKQWKELEAAEFEANVKRIELVAKQSRLILEAYAASNH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0115 398 MobiDBLite consensus disorder prediction 26 52 - -
Lal11g0115 398 PANTHER BNAANNG10740D PROTEIN-RELATED 12 394 IPR007592 GO:0006355
Lal11g0115 398 MobiDBLite consensus disorder prediction 1 164 - -
Lal11g0115 398 Pfam Protein of unknown function, DUF573 171 259 IPR007592 GO:0006355
Lal11g0115 398 PANTHER STOREKEEPER PROTEIN 12 394 - -
Lal11g0115 398 MobiDBLite consensus disorder prediction 121 136 - -
Lal11g0115 398 MobiDBLite consensus disorder prediction 53 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0115 Lal-Chr11 780989 782185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0115 88 393 GeBP Transcription Factor Family AT4G25210 32.934 3.78e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lal11g0115 DUF573 5.9e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0115 - - lang:109334524 514.227