Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0109 ATGTTCGACGGAGGAACTTTCAGGCCGCCACACACTATGCTCACTGTTTTGTTTTTCCTCTGCCTTGTTACTTTATCTCATTCAAATGAGGTTCAATCACTTACGAAGTTTAAGTCCTATATCCAAAGTTCAAATGACAATGTTTTCAGTTCTTGGATACAAGCAAATTTTCCATGCAACTTCACAGGGATTGTTTGCAACACCAATGGTTTTGTCTCACAAATCAACCTTGCACAGAAACAACTAGCTGGCACTCTTCATTTCGATTCAATTTGCGCGCTTCGATCAGTTGAAAAAATCTCTTTGGAGTCCAATTTCTTGCATGGTAGCATAAGTGAGGAGTTGAGGAATTGCAAAAACTTGAAGTACTTGAATTTGGCAGGGAATTCATTTATAGGAACAGTGCCTGATTTGTCAAGTTTGAACAAGTTAGAATACTTGAACTTAAATGGAAGTGGAATCTCTGGAGCATTTCCATGGAAATCATTGGAAAATCTAACAAGTATCACTTTCTTGAGCCTTGGTGATAACTTGTTTGAAAAAACTCATTTCCCTTTGGAGATCTTAAAGCTTGAAAATTTGTATTGGCTTTACTTATCAAATTGCAGCATCACTGGGAACATTCCATTGGGTATTGGAAACCTTACTCAGCTTCAAAATCTTGAGCTTTCTGATAATTATCTGTATGGTGAGATTCCTTCTGATATTGCAAAACTTCACAAGCTATGGCAACTTGAGCTTTATGACAATAATTTGAGTGGGAAAATTCCAATTGGATTTGGAAACCTTACCAATCTAGTCAAGTTTGATGCTTCTAACAATGACCTTGAAGGTGATCTTTCTGAACTAAGGTCCTTAATAAACCTTGCATCACTGCAGCTTTATCAGAATCATCTCTCAGGAGCAATTCCACAAGAGTTTGGAGATTTCAAAACCCTTACTGAAATCTCTCTTTATGATAACAAGCTCACAGGTTCTCTTCCACAAAACCTTGGCTCTTGGAAAGGCTTGGACTTCATAGATATTTCAGATAATTCATTTTCTGGTCATATACCACCTCACATGTGCAAGAACAACAGAATAGATGAGCTAGCATTGTTGAACAACAGCTTCACTGGAAGTATACCAGAAACATATGCAAATTGTACATCTTTGAAACGTTTTCGCCTTAATCAGAATTCACTTTCAGGCGTCGTTCCTTCGGGTATATGGAGCTTGCCAAATCTGATACTTATAGATTTTTCAATGAACAAGTTTGAAGGTCCAATAACATCTGATATTGGTAAAGCAAAATCTCTTGCTCAACTGTTTTTATCTGACAATCAGTTCTCAGGTGAGTTACCTTCAGAAATATCAGAAGCTTCTTCATTGGTATCTATTCAGATAAGTTCAAATCAAATTTCTGGTCACATACCAGAAGTAATTGGAAAATTGAAGAAACTAACTAGTCTTCATTTGGATAATAACAGCCTTTCTGGTATTATACCATACTCTATTAGTTCTTGTATTTCTCTTAATGAAATAAACCTTGCTGATAACTCTCTATATGGAGAAATACCACCTAGTATTGGTTCTCTACCTACCCTCAACTCATTGAACTTATCCTCCAATAAACTTTATGGTGAAGTTCCACCTAGTTTATCGCCTCATACGCTTAGCCTTCTCGATTTGTCAAACAACAATTTGGTTGGTCCAATACCAGAACCACTTGCTATTTCAGTTTTCAGAGATGGATTCGTGGGAAATCCTGGCTTATGCAGTCAGAGTTTAAAGGATTTCCAGCCATGTTCAATGGAATCAGGAAGGTCCAATACACACAGAACCCTTCTGCTATGTTTGATAGCTGGTTTAATGCTTATGCTTGTTTCTTCAGCATATTTCATCTTCATGAAACTGAACCACAACAAGTTTGAGAAGCCACTCAAGACTATTTCTTGGGATGTCAAGCAATACCACAAGCTAAACTTCAATGAGAATGAAGTTATTCAAGGGATCAAGGCTGAGAATTTGATTGGCAGTGGAGGATCAGGGAATGTTTACAAGATTGTACTTGAAAACGGTGCGGAATTCGCAGTGAAACACATATGGACTTCAAATCAAAGTGACCGCGAAAGTTGCAGAAGCAGTTCAGCTATGCTGAAAGGGAGTTCAAAGTCGCCTGAGTTTGATGCAGAAGTGGCCACTCTCAGTTCTATAAGGCATGTGAATGTGGTGAAGCTCTATTATAGCATCACAAGTGAAGATAGTAACCTTCTTGTTTATGAGTTGTTACAAAATGGAAGCTTGTGGGACAGGTTACACAGTTGTAGTAAGAAGACAAAGATGGGGTGGGAGGTTAGGTATGAAATAGCACTTGGAGCTGCTAGAGGATTGGAGTACCTGCACCATGGGTGTGATAGACCAGTTATACACAGAGATGTCAAGTCTAGTAACATATTGCTTGATGAGGAATGGAGGCCAAGGATTGCTGATTTTGGACTAGCCAAAATTGTGCAAGGAGGTGCAAGCAATTGGACCAATGTCATTGCTGGAACACTTGGATACATGGCTCCTGAGTATGGCTACACTGTTAAGGTGACAGAGAAGAGTGATGTTTACAGCTTTGGAGTAGTTCTAATGGAATTGGTAACAGGGAAGAGACCTGTTGAGGCAGAGTTCGGAGAAAACAAGGATATTGTGTATTGGGTATGCAACAATATGTGTAGAAAAAAAGAAAATGATATTGTTGAATTGGTGGATTCTACCATTACCAAACATTTCAAAGAAGATGCAATGAAGGTGTTGAGAATAGCAACATTATGCACTGCCAAAATCCCATCTTCAAGACCATCAATGAGAATGGTAGTTCAAATGCTGGAAGAGACAGAACCTTGTACTCTATCCAATGTAACTGTGACCATAAATAATTGA 2910 0.3838 MFDGGTFRPPHTMLTVLFFLCLVTLSHSNEVQSLTKFKSYIQSSNDNVFSSWIQANFPCNFTGIVCNTNGFVSQINLAQKQLAGTLHFDSICALRSVEKISLESNFLHGSISEELRNCKNLKYLNLAGNSFIGTVPDLSSLNKLEYLNLNGSGISGAFPWKSLENLTSITFLSLGDNLFEKTHFPLEILKLENLYWLYLSNCSITGNIPLGIGNLTQLQNLELSDNYLYGEIPSDIAKLHKLWQLELYDNNLSGKIPIGFGNLTNLVKFDASNNDLEGDLSELRSLINLASLQLYQNHLSGAIPQEFGDFKTLTEISLYDNKLTGSLPQNLGSWKGLDFIDISDNSFSGHIPPHMCKNNRIDELALLNNSFTGSIPETYANCTSLKRFRLNQNSLSGVVPSGIWSLPNLILIDFSMNKFEGPITSDIGKAKSLAQLFLSDNQFSGELPSEISEASSLVSIQISSNQISGHIPEVIGKLKKLTSLHLDNNSLSGIIPYSISSCISLNEINLADNSLYGEIPPSIGSLPTLNSLNLSSNKLYGEVPPSLSPHTLSLLDLSNNNLVGPIPEPLAISVFRDGFVGNPGLCSQSLKDFQPCSMESGRSNTHRTLLLCLIAGLMLMLVSSAYFIFMKLNHNKFEKPLKTISWDVKQYHKLNFNENEVIQGIKAENLIGSGGSGNVYKIVLENGAEFAVKHIWTSNQSDRESCRSSSAMLKGSSKSPEFDAEVATLSSIRHVNVVKLYYSITSEDSNLLVYELLQNGSLWDRLHSCSKKTKMGWEVRYEIALGAARGLEYLHHGCDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIVQGGASNWTNVIAGTLGYMAPEYGYTVKVTEKSDVYSFGVVLMELVTGKRPVEAEFGENKDIVYWVCNNMCRKKENDIVELVDSTITKHFKEDAMKVLRIATLCTAKIPSSRPSMRMVVQMLEETEPCTLSNVTVTINN 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0109 969 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 9 962 - -
Lal11g0109 969 Gene3D Transferase(Phosphotransferase) domain 1 757 964 - -
Lal11g0109 969 SMART LRR_typ_2 478 501 IPR003591 -
Lal11g0109 969 SMART LRR_typ_2 286 309 IPR003591 -
Lal11g0109 969 SMART LRR_typ_2 166 191 IPR003591 -
Lal11g0109 969 SMART LRR_typ_2 215 239 IPR003591 -
Lal11g0109 969 SMART LRR_typ_2 526 550 IPR003591 -
Lal11g0109 969 Gene3D Phosphorylase Kinase; domain 1 647 756 - -
Lal11g0109 969 Gene3D Ribonuclease Inhibitor 358 471 IPR032675 -
Lal11g0109 969 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
Lal11g0109 969 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lal11g0109 969 ProSiteProfiles Protein kinase domain profile. 665 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0109 969 SUPERFAMILY RNI-like 75 396 - -
Lal11g0109 969 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Lal11g0109 969 Gene3D Ribonuclease Inhibitor 138 357 IPR032675 -
Lal11g0109 969 SUPERFAMILY RNI-like 334 571 - -
Lal11g0109 969 Gene3D Ribonuclease Inhibitor 29 137 IPR032675 -
Lal11g0109 969 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Lal11g0109 969 Pfam Protein kinase domain 668 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0109 969 SUPERFAMILY Protein kinase-like (PK-like) 659 954 IPR011009 -
Lal11g0109 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 962 - -
Lal11g0109 969 SMART serkin_6 665 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0109 969 Gene3D Ribonuclease Inhibitor 472 597 IPR032675 -
Lal11g0109 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0109 Lal-Chr11 712933 718751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0109 11 966 Receptor kinase-like Gene Family AT1G09970 55.717 0.0 1042
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal11g0109 Pkinase 9.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0109 - - gmx:100811489 1431.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0109 11 712933 718751 Lal11g0109 11 712933 718751 ECH
Lal5g1788 5 19804655 19808697 Lal11g0109 11 712933 718751 LSH