Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0081 ATGGATAATCTCTGTTGCTTCAGCCCTGCTACTAAGGCGGCTGGAGGGCGTTCTTCTTCTAGCTCCGGCAAGGGCAAGAGCCATAAGAGCCCAGTCAAGTATGGCTTTAGCCTGGTTAAAGGCAAAGCAAACCACCCAATGGAGGACTATCATGTCGCAAAATTTGTCATGCTCAATGGCGAAGAACTAGGACTTTTTGCTATTTACGATGGACACTTAGGAGACAGTGTACCCGCTTATTTACAAAAGAATCTCTTTTCTAATATATTGAAGGAAGATGAGTTCTGGACTGATCCAAGCAGTTCTATCATCAAAGCATATGAAACAACAGACCAGGCCATTCTTTCTCACGATCCTGATTTAGGGCGAGGAGGGTCGACTGCAGTGACTGCAATTCTTATAAATAATCAGAAATTATGGGTAGCGAATGTTGGAGATTCACGAGCGGTTCTGTCAAAGGGAGGGGTGGCCATTCAGATGAGTATCGATCATGAGCCCAATACTGAAAGGGGTTTCATTGAGAACAAAGGTGGCTTTGTCTCAAATCTTCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGGGCATTCGGAGACAAAAACCTGAAGTCACACTTGCGAGCTGACCCTGACGTAGAACAAGATGATATTGACTCGGATAGTGAACTTTTGATACTTGCTAGTGATGGTGTATGGAAGGTAATGGCAAACCAAGAAGCAGTTGATATTGCAAGAAGAATAAGAGATCCACAAAAAGCAGCCAAAGAAGTAGTTGATGAGGCATTGGACAGAGAGAGTAAGGATGATATATCCTGCATTGTAGTTCGTTTCAAGCCATGA 849 0.4405 MDNLCCFSPATKAAGGRSSSSSGKGKSHKSPVKYGFSLVKGKANHPMEDYHVAKFVMLNGEELGLFAIYDGHLGDSVPAYLQKNLFSNILKEDEFWTDPSSSIIKAYETTDQAILSHDPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSKGGVAIQMSIDHEPNTERGFIENKGGFVSNLPGDVARVNGQLAVSRAFGDKNLKSHLRADPDVEQDDIDSDSELLILASDGVWKVMANQEAVDIARRIRDPQKAAKEVVDEALDRESKDDISCIVVRFKP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0081 282 Gene3D - 15 282 IPR036457 -
Lal11g0081 282 MobiDBLite consensus disorder prediction 13 27 - -
Lal11g0081 282 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 281 - -
Lal11g0081 282 MobiDBLite consensus disorder prediction 11 31 - -
Lal11g0081 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Lal11g0081 282 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Lal11g0081 282 SMART PP2C_4 29 278 IPR001932 -
Lal11g0081 282 CDD PP2Cc 32 280 IPR001932 -
Lal11g0081 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Lal11g0081 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0081 Lal-Chr11 540436 544902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0081 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.732 1.34e-147 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0081 K17506 - gmx:100787659 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0034 3 202709 205257 Lal11g0081 11 540436 544902 LSH