Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0080 ATGGCGGAAGCTGCTTCTTACGGATTGGGTCCTCGATTAGATATTCAGCAATTACAAATTGAAGCCCAGCATCGGTGGTTGCGACCTGCAGAAATTTGTGAAATTTTACGTAATTATCGGATGTTTCACATCACACCAGAACCTCATAACAGGCCACCAAGTGGTTCGCTTTTTATTTTTGATCGTAAGGTTTTGAGATACTTTAGAAAGGATGGCCACAATTGGAGAAAGAAAAAAGATGGAAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTATTATGCCCATGGAGAAGATAATGAAAATTTTCAGAGGCGAAGCTACTGGATGCTTGAACCAGATATGATGCACATAGTTTTTGTTCACTACTTGGAAGTTAAGGGTAACAAGACAACTATTGGAGGAATTACAGAAAGTGATGATGTTACAACAGATTCCCAAAAGGTCACCTCTCCATCATCTGGCTTTCCTGTAAATTATAGCACTGCGCCTTCACTGAGTACAGATTCCATGAGCCCAACTAGCAGCCTGACATCTTTACGTGAAGATGCTGATTCTGAGGATATTCACCAAGCAAGTTCTGGATTACGCCCGTTACGTGCGTCACAATATATGGGAAACGGTCTTCTGACGGACAAGCTGGATGCTGGATTGAACAGTTCTAATCTTCTTCATCCCATTTTAGGTGGTCATGGGCAGTCTTCAACTTCTGGAACAGATTATACCCCTCTTCTTCCAGGGGATAAGTTTAGAGGAAATGATACTACTTATATTGATGGCCAGAAAGCACATGGCATGGCATCCTGGGACAATAGCTTGGAGCAATGCACTATGGCATTGCATACTGATCCTTCTCTTGTATCATTTCCTTCCATCCCATCCAGTTTGGTGGGAAACATTCTTGATCAAGAACATACCGTTTTCAGTGACCTGTTAGTGGGTAGAAGTGGCTTCACTGAGGAGGCAGGAAGCTCTCAGTCTCTCCAATCAAATTGGCAGATTCCTTTTGAAGACAATTCAGGACACTTTCCAACCATAACCCAATCACCAAGTTTGGATTTTGGATCTGAATATAGCACTGGTTTACTAGGGAATGAAACTCATAGTGTTAGTTCTGAAATTGCTCAAAACCTGTTTAGTTTTCATGGTAAGTCAGAAGAGCAGCATTTGCAGCAATACTATCCAGAGCAGCATGAAGACAGACAAGATCAACTTGCACTAAAACTCAGTTCGGTGAATAAAGTTTCTGGTGAAGAAAGTATTAACTATGCCTTCACTGCAAAACGCACATTATTGGATAGAGACGAAAGCCTGAAGAAGGTTGATAGTTTCTCTCGGTGGGTTAGTAAAGAGCTTGGGGAGGTTGATGATTTGAATATGCAGTCCTCACCTGGTATTTCATGGAGTACAGATGAATGTGGGCATGTGATAGATGATGCCTCATTGAGCCCATCCCTGTCTCGGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAAATGGGCTTCTTCTGAATCAGAAACTGAGGTGTTGATTATTGGAGCATTTTTGAAGAGTCAACCTGAGGGGACCACCTGTAACTGGTCCTGTATGTTTGGGGAGGTGGAGGTTCCTGCTGAGGTTTTAGCTAATGGAATTCTGTGCTGTCAAGCTCCACCTCTTAAGATTGGACGAGTCCCCTTCTATGTAACATGTTCCAATCGGTTAGCTTGTAGTGAAGTGCGGGAATTCGATTACAGAGAGGGCATTTCTGGAAATGTAGATTTTGCAGATATCTATCACAGTTCATTTGAAATGGCGCTTCATTTGCAAGTGGAGGAGTTGCTTTCTTTAAAACCAGTGTATCTTTCAAATCAAACTTTTGAGGGTTATATGGAGCAAAGAAACATAATTTTTAAGCTTATTTCACTGAGGGAGGAAGAGGATTATTCAAGTAAGGATGAGCACAGTGTAGAGATGGATATATCACTACAAAAGGTTAAGGACCATTTTCACAGGCAGGTTAAAGAGAAACTGTATTCATGGCTTCTTCGCATAGTAACTGGCAGTGGTAAAGGGCCAAATATCCTAGACAAAAATGGGCAAGGAGTGTTACATTTAGCTGCTGCTCTTGGTTATGACTGGGGCATAAAACCAATTTTATTTGCTGGAGTTAATATCAATTTCCGTGATGTGAATGGTTGGACAGCTCTACATTGGGCTGCATTCCGTGGCCGAGAGCGGACAGTTGCTGTCCTTGTCTCCATGGGTGCGGATTCTGGAGCTTTGACTGATCCATCTCCAGAATTTCCTTCAGGTAGAACACCTTCAGATATTGCATCTAGCAATGGGCACAAAGGAATATCTGGTTTTCTTGCTGAGTCTTTATTAACCAGACACCTCGAATCTCTCACAATGGATGATCAACACAAAGGTGGTAGGCAACAAATTTCAGGGTTGAACTCAGTGCAGACAGTTTCCGAAAAAATCGCAACTCCTGTGTTCTACGGTGATATGCCAGATTCCCTCAGTCTCAAGGATTCTCTTACTGCTGTCCGTAATGCTATACAAGCTGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAATTAAATCAGTGTGAAGATGATGATGAGTTTGGGTTGGGGGAGCAGCAAGTGCTTTCCCTTATAGCTTCGAAGAAATGCAAATCGGGACAAGGAGATGGTTTAGTCAATGCTGCTGCGGTAAAGATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGACAAGAGTTCTTGTTCATTCGTCAGAGAGTTGTTAAAATCCAGGCCCATGTTAGAGGTCACCAGGTAAGGAAGAAGTATAAAACAATCATCTGGTCTGTGGGAATATTGGAGAAGGTTATATTGCGCTGGAGACGCAAGGGCAGTGGTTTACGTGGATTTCGACAAGATGCCCTTCCTAAGGCTCCCAGCCAACAAAGTGATCCTGTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAAAGTGAGGAAAAGTTCCAAAAGGCCCTTTCAAGGGTGAAGTCCATGGTTCAGTATCCAGAGGCAAGGGCTCAATACCGGCGGCTGCTAAATGTCGTTGAGGAATTCCATCAAACCAAGACATGCAACATGGATTTGATCAATATTGAAGACACGGTTGATGGTGTGGAGGACTTGATTGATATTGATATGCTTCTAGATGATGATAATTTCATTCCTATTGCATTTGATTGA 3267 0.4224 MAEAASYGLGPRLDIQQLQIEAQHRWLRPAEICEILRNYRMFHITPEPHNRPPSGSLFIFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEDNENFQRRSYWMLEPDMMHIVFVHYLEVKGNKTTIGGITESDDVTTDSQKVTSPSSGFPVNYSTAPSLSTDSMSPTSSLTSLREDADSEDIHQASSGLRPLRASQYMGNGLLTDKLDAGLNSSNLLHPILGGHGQSSTSGTDYTPLLPGDKFRGNDTTYIDGQKAHGMASWDNSLEQCTMALHTDPSLVSFPSIPSSLVGNILDQEHTVFSDLLVGRSGFTEEAGSSQSLQSNWQIPFEDNSGHFPTITQSPSLDFGSEYSTGLLGNETHSVSSEIAQNLFSFHGKSEEQHLQQYYPEQHEDRQDQLALKLSSVNKVSGEESINYAFTAKRTLLDRDESLKKVDSFSRWVSKELGEVDDLNMQSSPGISWSTDECGHVIDDASLSPSLSRDQLFSINDFSPKWASSESETEVLIIGAFLKSQPEGTTCNWSCMFGEVEVPAEVLANGILCCQAPPLKIGRVPFYVTCSNRLACSEVREFDYREGISGNVDFADIYHSSFEMALHLQVEELLSLKPVYLSNQTFEGYMEQRNIIFKLISLREEEDYSSKDEHSVEMDISLQKVKDHFHRQVKEKLYSWLLRIVTGSGKGPNILDKNGQGVLHLAAALGYDWGIKPILFAGVNINFRDVNGWTALHWAAFRGRERTVAVLVSMGADSGALTDPSPEFPSGRTPSDIASSNGHKGISGFLAESLLTRHLESLTMDDQHKGGRQQISGLNSVQTVSEKIATPVFYGDMPDSLSLKDSLTAVRNAIQAADRIHQVFRMQSFQRKQLNQCEDDDEFGLGEQQVLSLIASKKCKSGQGDGLVNAAAVKIQKKFRGWKKRQEFLFIRQRVVKIQAHVRGHQVRKKYKTIIWSVGILEKVILRWRRKGSGLRGFRQDALPKAPSQQSDPVKEDDYDFLKEGRKQSEEKFQKALSRVKSMVQYPEARAQYRRLLNVVEEFHQTKTCNMDLINIEDTVDGVEDLIDIDMLLDDDNFIPIAFD 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0080 1088 Gene3D - 912 959 - -
Lal11g0080 1088 ProSiteProfiles Ankyrin repeat profile. 735 767 IPR002110 GO:0005515
Lal11g0080 1088 MobiDBLite consensus disorder prediction 145 206 - -
Lal11g0080 1088 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1088 - -
Lal11g0080 1088 ProSiteProfiles IQ motif profile. 935 959 IPR000048 GO:0005515
Lal11g0080 1088 Gene3D Immunoglobulins 496 592 IPR013783 -
Lal11g0080 1088 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Lal11g0080 1088 SMART ANK_2a 735 764 IPR002110 GO:0005515
Lal11g0080 1088 SMART ANK_2a 702 731 IPR002110 GO:0005515
Lal11g0080 1088 MobiDBLite consensus disorder prediction 145 189 - -
Lal11g0080 1088 SUPERFAMILY Ankyrin repeat 685 795 IPR036770 -
Lal11g0080 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 912 962 IPR027417 -
Lal11g0080 1088 Pfam Ankyrin repeats (3 copies) 707 795 IPR002110 GO:0005515
Lal11g0080 1088 Pfam IPT/TIG domain 503 581 IPR002909 -
Lal11g0080 1088 ProSiteProfiles Ankyrin repeat region circular profile. 735 761 - -
Lal11g0080 1088 ProSiteProfiles IQ motif profile. 913 941 IPR000048 GO:0005515
Lal11g0080 1088 Gene3D - 668 797 IPR036770 -
Lal11g0080 1088 SMART iq_5 911 933 IPR000048 GO:0005515
Lal11g0080 1088 SMART iq_5 934 956 IPR000048 GO:0005515
Lal11g0080 1088 Pfam IQ calmodulin-binding motif 914 932 IPR000048 GO:0005515
Lal11g0080 1088 Pfam IQ calmodulin-binding motif 937 956 IPR000048 GO:0005515
Lal11g0080 1088 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Lal11g0080 1088 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1088 - -
Lal11g0080 1088 SUPERFAMILY E set domains 503 589 IPR014756 -
Lal11g0080 1088 SMART CG_1_2 18 136 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0080 Lal-Chr11 528020 537290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0080 1 1052 CAMTA Transcription Factor Family AT5G64220 52.268 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lal11g0080 CG-1 1.5e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0080 K21596 - gmx:100818124 1663.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0033 3 191700 201401 Lal11g0080 11 528020 537290 LSH