Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0073 ATGGATGCTTTATCCTTAAGCTCAAGCAATTGCATTTCCAAGCCAATGAGACTCTCAAATAACCAAAAACGTCTTTCTCCTTTCCATTTCTCAGTTTCATGCAAATCCACAACAAAGACTATTGCTCATACTAATGGCAACAACAACTTCTACAACATGCTTTCTTTGTGTCCCAAAAGTGCAACCATGGATGACATAAAGAAAGCTTATAGGTCAATGGCACTTAGGTACCACCCTGATGTGTGCCATGATGTTTCCAAGAAAGAGGAATCAACTAGGATGTTTGTGCAACTCAATGCAGCTTACAACACTTTGTCCAATCCAAGGCTTAAAGCTGAGTATGATTCTGAGTTGTTGGGTTATAGAGGACAAAGGAGTACTAATAATGTTGGTAATGATGAATATGAGAGTTGGAGATGTAGATGGCAAGAACAAATGGTTGAGTTGAAGAGAAGGACTCATAGAGGTGTGGTACAAAAGGAAGGATCATGGGGCAGTAGAATGAGAGCAAAAAACATGAATATGAATTACCATAACTAA 540 0.387 MDALSLSSSNCISKPMRLSNNQKRLSPFHFSVSCKSTTKTIAHTNGNNNFYNMLSLCPKSATMDDIKKAYRSMALRYHPDVCHDVSKKEESTRMFVQLNAAYNTLSNPRLKAEYDSELLGYRGQRSTNNVGNDEYESWRCRWQEQMVELKRRTHRGVVQKEGSWGSRMRAKNMNMNYHN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0073 179 PRINTS DnaJ domain signature 52 70 IPR001623 -
Lal11g0073 179 PRINTS DnaJ domain signature 70 85 IPR001623 -
Lal11g0073 179 PRINTS DnaJ domain signature 90 110 IPR001623 -
Lal11g0073 179 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 10 175 - -
Lal11g0073 179 SUPERFAMILY Chaperone J-domain 41 119 IPR036869 -
Lal11g0073 179 CDD DnaJ 49 107 IPR001623 -
Lal11g0073 179 Gene3D DnaJ domain 35 146 IPR036869 -
Lal11g0073 179 ProSiteProfiles dnaJ domain profile. 49 118 IPR001623 -
Lal11g0073 179 Pfam DnaJ domain 49 115 IPR001623 -
Lal11g0073 179 ProSitePatterns Nt-dnaJ domain signature. 95 114 IPR018253 -
Lal11g0073 179 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 10 175 - -
Lal11g0073 179 SMART dnaj_3 48 110 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0073 Lal-Chr11 490484 491023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0073 51 116 C2H2 Transcription Factor Family AT1G74250 36.765 1.14e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0073 - - vun:114187063 187.193