Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0072 ATGAGTCAGCGTATAAGCGACGAGGTTGTGGCGAGTGCGCTGGGGGAATCAAGAACTGGACCTTCTTCAGGTAGACATGGCAATGCATTGGCTCATAGTCACAAGGTTGGATCTCCTCCGAGGAAGACTCTTTTTGAAGACATCAAACTTTCTGTGAAGGAAATTTTCTTCTCAGACAACCCTGTAAAGGAATTTAAGGACCAAACCTTAGGAAGAAAGCTTGTTCTCGGCCTCGAAGCAGTTTTCCCGATTTTAAGATGGGCTAGAGGTTACAACTTTAAATCATTCCGAGGTGATTTCATTTCTGGACTTACCATTGCAAGTCTTTGTATCCCACAGGACATTGCATATGCAAAGCTTGCAAATTTGGATCCTGAATATGGACTATATACTAGCTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATGGCGATAGGACCAGTAGCAGTGGTGTCCCTCTTGTTAGGGACTACGCTTAGCGATGAGATTAAGGATTTCCATGATCCTAATTACCTGCGTCTCGCGTTTACTGCCACCTTCTTTGCAGGAGTTACTCAAATGACACTAGGAGTTTTAAGGCTCGGTTTCTTGGTTGACTTTCTATCTCATGCTGCCATTGTGGGATTCATGGCTGGAGCAGCCGTTACTATTGCGCTGCAACAGCTTAAAGGTCTGCTTGGCATAGTGACATTTACTAAGAAAACTGATATTATTTCTGTCATGAGGTCAGTTTGGAGTACAGTGCACCATGGGTGGAATTGGGAGACAATAGTGATTGGAATGTCATTCTTGACCTACCTTCTAGTAACCAAGTATATTGCTAAAAGGAAAAAGAAACTCTTTTGGGTGGCTGCAATTGCTCCTATGATCTCTGTCATATTGTCTACACTTTTTGTGTACATTACTAGGGCTGACAAGAAGGGCGTTGCGATAGTGAGACACATTAAAAAAGGTGTGAATCCAGCATCTGCTGGTGAAATATTTTTCAGTGGAAAATATTTGGCTGCGGGTGCTCGGATCGGTGTGGTAGCTGGCATGATAGCACTCACGGAAGCTATAGCAATTGGGAGAACATTTGCTGCTATGAAAGACTATCCACTTGATGGTAATAAAGAAATGGTGGCTATGGGAACAATGAACATTATTGGTTCACTGACATCATGTTATGTAGCTACAGGGTCATTTTCTCGATCAGCAGTGAACTTTATGGCTGGTTGTAAAACCGCTGTATCAAACATCGTTATGTCCATTGTTGTACTGCTAACTCTATTAGTCATTACACCATTGTTTAAGTATACACCAAATGCAGTATTGGCTGCTATTATAATAGCTGCCGTGGTAGGCCTTATCGACATTGAAGCTGTAATTCTGCTATGGAAGATTGACAAATTCGACTTTGTAGCTTGCATTGGAGCCTTCTTTGGTGTGATATTCAAAAGTGTTGAGATCGGCCTTCTAATTGCGGTTGCAATATCTTTTGCTAAAATCCTTTTACAAGTAACAAGGCCAAGGACTATAGTACTTGGGAAGCTTCAAGGGACTAGTGTTTATAGGAACATCAATCAATACCCCAGAGCATCTCAAATTCCAGGCATGCTCATTATTAGAGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGACTGATGAAGATGTCCAAAGGATAGGAAGTGAATTTCCCAGAATACAGTATCTTGTCATCGAAATGTCGCTGAATTTATTTGTGCAACCTTATATTCATGCAGCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGTGGAGTTATATAAGAGCCTTCATAAAAGGGAAGTACAGCTTTTGTTGGCAAACCCGGGACCAATTGTGATGGAGAAGCTCCATGCATCGAAGTTAACTAACTTAATTGGAGAAGATAAAATATTTCTATCAGTGGCTGATGCTGTTGCAACTTTTGGTGCATAG 1992 0.4147 MSQRISDEVVASALGESRTGPSSGRHGNALAHSHKVGSPPRKTLFEDIKLSVKEIFFSDNPVKEFKDQTLGRKLVLGLEAVFPILRWARGYNFKSFRGDFISGLTIASLCIPQDIAYAKLANLDPEYGLYTSFVAPLVYAFMGSSRDMAIGPVAVVSLLLGTTLSDEIKDFHDPNYLRLAFTATFFAGVTQMTLGVLRLGFLVDFLSHAAIVGFMAGAAVTIALQQLKGLLGIVTFTKKTDIISVMRSVWSTVHHGWNWETIVIGMSFLTYLLVTKYIAKRKKKLFWVAAIAPMISVILSTLFVYITRADKKGVAIVRHIKKGVNPASAGEIFFSGKYLAAGARIGVVAGMIALTEAIAIGRTFAAMKDYPLDGNKEMVAMGTMNIIGSLTSCYVATGSFSRSAVNFMAGCKTAVSNIVMSIVVLLTLLVITPLFKYTPNAVLAAIIIAAVVGLIDIEAVILLWKIDKFDFVACIGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTIVLGKLQGTSVYRNINQYPRASQIPGMLIIRVDSAIYFSNSNYIKERILRWLTDEDVQRIGSEFPRIQYLVIEMSLNLFVQPYIHAAVTDIDTSGIHAFVELYKSLHKREVQLLLANPGPIVMEKLHASKLTNLIGEDKIFLSVADAVATFGA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0072 663 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Lal11g0072 663 MobiDBLite consensus disorder prediction 13 38 - -
Lal11g0072 663 PANTHER SULFATE TRANSPORTER 19 662 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal11g0072 663 SUPERFAMILY SpoIIaa-like 528 661 IPR036513 -
Lal11g0072 663 Pfam STAS domain 528 657 IPR002645 -
Lal11g0072 663 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Lal11g0072 663 Gene3D STAS domain 522 663 IPR036513 -
Lal11g0072 663 ProSiteProfiles STAS domain profile. 527 661 IPR002645 -
Lal11g0072 663 TIGRFAM sulP: sulfate permease 83 657 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal11g0072 663 CDD STAS_SulP_like_sulfate_transporter 528 654 - -
Lal11g0072 663 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 19 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0072 Lal-Chr11 482243 486260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0072 22 658 Inorganic Solute Cotransporters AT1G22150 70.219 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0072 K17470 - gmx:100784124 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1822 5 20008414 20012459 Lal11g0072 11 482243 486260 LSH