Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0067 ATGGTGAACGTTCCAAAGACGAGGAAAACATATTGCAAAAACAAGGAGTGTAAAAAGCACACACTGCACAAAGTGACACAATACAAGAAGGGAAAGGATAGTACTGCTGCTCAAGGTAAGAGACGTTATGATCGCAAGCAATCTGGTTATGGTGGCCAGACCAAGCCTGTTTTCCACAAAAAGGCAAAAACTACTAAGAAAATTGTCTTGAGGCTGCAATGCCAGGGTTGCAAGCATGTCTCCCAACGTGCCATTAAGAGGTGCAAGCATTTTGAGATAGGTGGTGACAAGAAGGGAAAAGGAACATCTCTTTTCTAA 318 0.4277 MVNVPKTRKTYCKNKECKKHTLHKVTQYKKGKDSTAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQRAIKRCKHFEIGGDKKGKGTSLF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0067 105 Pfam Ribosomal protein L44 19 94 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lal11g0067 105 MobiDBLite consensus disorder prediction 28 62 - -
Lal11g0067 105 ProSitePatterns Ribosomal protein L44e signature. 63 74 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lal11g0067 105 Gene3D - 1 105 - -
Lal11g0067 105 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 2 105 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lal11g0067 105 SUPERFAMILY Zn-binding ribosomal proteins 2 94 IPR011332 GO:0006412
Lal11g0067 105 MobiDBLite consensus disorder prediction 28 48 - -
Lal11g0067 105 PANTHER 60S RIBOSOMAL PROTEIN L44-LIKE 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0067 Lal-Chr11 453764 455610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0067 1 105 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 93.333 2.24e-68 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0067 K02929 - ini:109148838 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0028 3 159756 162909 Lal11g0067 11 453764 455610 LSH
Lal14g0921 14 11616487 11618114 Lal11g0067 11 453764 455610 PCT
Lal19g0208 19 1903564 1905335 Lal11g0067 11 453764 455610 PCT
Lal11g0067 11 453764 455610 Lal14g0921 14 11616487 11618114 PCT
Lal11g0067 11 453764 455610 Lal19g0208 19 1903564 1905335 PCT