Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0058 ATGGATCATGCAGGTGATACAAACAGGACAGATTTGATGACCATAACTAGGTTTGTTCTTAATGAGCAATCAAAGTATCCAGAATCACGTGGAGATTTCACCATCCTAATCAGCAACATTGTTCTTGGACTTGCTGGAGAGACCAATGTTCAAGGTGAGGAGCAAAAGAAATTAGATGTGCTTTCTAATGAAGTATTTGTGAAGGCCTTAGTCAGCAGTGGACGCACTTGCCTTCTTGTATCAGAAGAGCTTGAAGAGGCTATATTTGTGACACCATCACAGCATGGAAAATACATTGTTGTGTTTGATCCTCTGGATGGATCCTCAAACATTGATTGTGGTGTCTCTATAGGAACTATCTTTGGAATTTACATGGTAAAGGATAAAGATAATGTTACTCTTGATGATGTGTTGCAACCTGGGAACAAAATGTTAGCAGCTGGTTATTGCATGTATGGAAGCTCATGCACGTTTGTGATTAGCACAGGAAATGGAGTGAATGGTTTTACACTTGATCCTTCCCTTGGAGAGTTCATATTGACTCACCCAAACATCAAGGTACCAAGGAAAGGAAAGATTTATTCAGTGAATGAGGGAAATGCCAAAAACTGGGATGAACCAACAACTAAATATGTAGAAAATTGCAAGTTTCCTAAAGATGGTTCACCACCAAAGTCTCTTAGGTACATTGGAAAAGAACGGGCACTTGACTTGGTTCCAAGCCATATACATGAAAGATCGCCTGTATTCCTCGGCAGCTATGAAGAAATGGAGTACATTAAAGAGCTTTATGCTGCATGCTAA 804 0.398 MDHAGDTNRTDLMTITRFVLNEQSKYPESRGDFTILISNIVLGLAGETNVQGEEQKKLDVLSNEVFVKALVSSGRTCLLVSEELEEAIFVTPSQHGKYIVVFDPLDGSSNIDCGVSIGTIFGIYMVKDKDNVTLDDVLQPGNKMLAAGYCMYGSSCTFVISTGNGVNGFTLDPSLGEFILTHPNIKVPRKGKIYSVNEGNAKNWDEPTTKYVENCKFPKDGSPPKSLRYIGKERALDLVPSHIHERSPVFLGSYEEMEYIKELYAAC 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0058 267 Gene3D - 4 185 - -
Lal11g0058 267 SUPERFAMILY Carbohydrate phosphatase 9 264 - -
Lal11g0058 267 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 41 183 IPR033391 -
Lal11g0058 267 CDD FBPase 20 264 IPR000146 GO:0005975|GO:0016791
Lal11g0058 267 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 187 231 IPR044015 -
Lal11g0058 267 Gene3D - 232 266 - -
Lal11g0058 267 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 42 231 IPR000146 GO:0005975|GO:0016791
Lal11g0058 267 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 231 266 IPR000146 GO:0005975|GO:0016791
Lal11g0058 267 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 43 IPR000146 GO:0005975|GO:0016791
Lal11g0058 267 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC 2 43 - -
Lal11g0058 267 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC 42 231 - -
Lal11g0058 267 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC 231 266 - -
Lal11g0058 267 PIRSF FBPtase_SBPase 34 232 IPR000146 GO:0005975|GO:0016791
Lal11g0058 267 PIRSF FBPtase_SBPase 231 267 IPR000146 GO:0005975|GO:0016791
Lal11g0058 267 Gene3D - 186 231 - -
Lal11g0058 267 PRINTS Fructose-1,6-bisphosphatase signature 57 83 IPR028343 GO:0042132
Lal11g0058 267 PRINTS Fructose-1,6-bisphosphatase signature 137 160 IPR028343 GO:0042132
Lal11g0058 267 PRINTS Fructose-1,6-bisphosphatase signature 168 191 IPR028343 GO:0042132
Lal11g0058 267 PRINTS Fructose-1,6-bisphosphatase signature 194 221 IPR028343 GO:0042132
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0058 Lal-Chr11 412742 416873 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lal11g0058 FBPase 4.9e-63 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0058 K03841 - gmx:100797157 442.965