Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0055 ATGATGAAGAGTATGAGAAACTTGGTGCATGGGTTGAAGCCAGCCATACTAATGGTGGTGGTGCAAATAGCAAATGCTTGGGTTAATGTCATGTACAAGCTTGCGGTCAATGATGGCATGAGCTTGAGGGTTGTTGTTGCTTACCGCTATATTTTTGCAACTGCTTTCATAGCTCCACTTGCTTTCATTCTTGAAAGGAAGACTAGGCCAAAGATGAGTTGGACGGTTCTGTTTCAGGCATTTCTGTGCGGCTTATTTGGTGGAGCATTGCCTCAAAATTTACACATGGAAGCTATCGCTTTAACATCTGTGACATTTACAACTGCCGTATCCAACCTCATTCCAGCCATCACTTTCATTTTGTCTCTCTTATTTGGTTTAGAAACATTAAATTTGAGAGCAGCAGGAGGGAGGGCCAAGATGACTGGAACAATAATAGGAATTGGTGGTGCAATGATACTAACATTCATTAAAGGTGTCCAAATTAACATATTTTCGTTCCACATAAACCTTTTCAATCATAAAAACAGTAATGTTGTACATCCACAAGTTAGTTCCCATGGCATGTTCATCTTAGGTGCTTTCTCCTCTTTTGCCAGCAACATCTCTTATGCTCTATGGCTCATCATTCAGGCAAAGATGAGTGAAAGATACCCATGTCCTTATTCAAGCACAGCATTAATGTCTCTAATGGGAGCACTCTTATCCATTACGTTTACTTTTTTGCTTGAGAGGGATTTGAGTCAATGGAGATTGGGTTGGAATGTTAGGCTAATAACAGTAGCTTATGCGGGAATAGTTGTTTCTGGAGTAATGGTGGCTGTGATTTCATGGTGTGTAAGGAGGAGAGGCCCATTGTTTGTCTCTGTTTTTAGCCCTCTAATGCTTGTTGTTGTTGCCTTTGCTGGATCCACCATTTTGGACGAAAACCTATATCTTGGAAGCATAATTGGATCATTGTTGATTGTTTGTGGCTTATACATAGTTCTATGGGGTAAAAGCAAAGAGATGAAGAAGAATATTGAATCTCTGTCACCAAATGGCCAACATGATTTCAAAACTGTGGAAATAATTGTGAAGTCTCCGGTATTATTGGATACTGCAAACCACAAGAATTACAACAATACCCTCGATAATATTGGTGGAAAAGAAGTGATATCTCGAAATACAGGCTTAAATAATTAA 1185 0.3941 MMKSMRNLVHGLKPAILMVVVQIANAWVNVMYKLAVNDGMSLRVVVAYRYIFATAFIAPLAFILERKTRPKMSWTVLFQAFLCGLFGGALPQNLHMEAIALTSVTFTTAVSNLIPAITFILSLLFGLETLNLRAAGGRAKMTGTIIGIGGAMILTFIKGVQINIFSFHINLFNHKNSNVVHPQVSSHGMFILGAFSSFASNISYALWLIIQAKMSERYPCPYSSTALMSLMGALLSITFTFLLERDLSQWRLGWNVRLITVAYAGIVVSGVMVAVISWCVRRRGPLFVSVFSPLMLVVVAFAGSTILDENLYLGSIIGSLLIVCGLYIVLWGKSKEMKKNIESLSPNGQHDFKTVEIIVKSPVLLDTANHKNYNNTLDNIGGKEVISRNTGLNN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0055 394 PANTHER WAT1-RELATED PROTEIN 13 367 - -
Lal11g0055 394 PANTHER WAT1-RELATED PROTEIN 13 367 IPR030184 GO:0016021|GO:0022857
Lal11g0055 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
Lal11g0055 394 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Lal11g0055 394 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Lal11g0055 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0055 Lal-Chr11 392327 397471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0055 2 347 Nodulin-like Gene Family AT1G68170 45.376 3.84e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0055 - - gmx:100788378 558.525