Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0052 ATGAAGAGTATATACAATATATTGGATGGGTTGAAACCAGTGATGCTAATGGTGATGGTGCAGGTTGCATTTACTGCAGTCAATGTTCTCTACAAGCTTGCCATAAACGATGGAATGAGTGTGAGGGTAGCTACTGCTTATAGACTAGCTTTTGGATCAGCTTTTACTGTTCCTCTTGCTCTCATTTCTGAAAGGAATAACAGACCAAAGCTGACTCGGAGGGTGCTTTTCATGGCATTTCTTTGTGGCTTGTTTGGGGGAAGCTTATTTCAAAACCTTTTCTATGGGGCTCTCGCTTTGACATCAGCAACATTTGTGTCTGCTATATACAACCTCATTCCAGCTATCACCTTTATTTTAGCCATCTCCTCCGGTTTCGAAAAATTGAATTTGAGGGCAGCAGCAGGAAAAGCCAAGGTGTTAGGAACTCTAATAGGAATTGGAGGGGCAATGTTTTTGACCTTTTACAAAGGAATAAAAATTAATATTTGGCCCTTCCACATCAACCTTTTGCATTCAAATGGTCATGTGATACCATTACATGCTGACTCTAATAATAAGTTGGTGGGTGTTCTATGTGCCATAGCAAGTTGTTTCTCTTATGCTTTCTGGCTTATCATTCAGGCTAAGATGAGCAAAGAATATTCAAGCCATTACTCAAGTACAGCTTTGATGTCTACATCAGGGGCAATACAAGCCACCATTTATGGTCTTTGTGTTGAGAGGGATTGGAGTCAATGGAAGTTGGGTTGGAATATTAGGCTACTAACCGTAGCTTATTCGGGAATCGTGGGCACTGGATTAGTGGTTATTGTGATTGCGTGGTGCATACATATGAGAGGGCCTCTATTTGCTTCTGTTTTCAACCCTCTAATGCTCATCCTTGTGGCTGTTGCAGCTTCTTTGATGTTGAATGAGAACTTATGTTTAGGAAGTGTGCTTGGAGCAGTGTTGATTGTGTGTGGACTATACATGGTGCTTTGGGGTAAGAGAAAAGAAATGAAAAATATGACTCAATTAGTGCCATCAGAAATCGTCAAAGATACTGAAGCTGTAGAAGTTATTGTTATGTCCACTCCAATTATAGATAATGATAAATGTCACTACCACAACCAAACAAGTACTATTAAGAATGTTGACAAAGATGTAGAGTATTTGTCACGAAATGAAGAAGAATATGACATTCACAGTAAAGAGAGAGATGAAGTAATATAG 1215 0.3942 MKSIYNILDGLKPVMLMVMVQVAFTAVNVLYKLAINDGMSVRVATAYRLAFGSAFTVPLALISERNNRPKLTRRVLFMAFLCGLFGGSLFQNLFYGALALTSATFVSAIYNLIPAITFILAISSGFEKLNLRAAAGKAKVLGTLIGIGGAMFLTFYKGIKINIWPFHINLLHSNGHVIPLHADSNNKLVGVLCAIASCFSYAFWLIIQAKMSKEYSSHYSSTALMSTSGAIQATIYGLCVERDWSQWKLGWNIRLLTVAYSGIVGTGLVVIVIAWCIHMRGPLFASVFNPLMLILVAVAASLMLNENLCLGSVLGAVLIVCGLYMVLWGKRKEMKNMTQLVPSEIVKDTEAVEVIVMSTPIIDNDKCHYHNQTSTIKNVDKDVEYLSRNEEEYDIHSKERDEVI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0052 404 PANTHER WAT1-RELATED PROTEIN 12 364 IPR030184 GO:0016021|GO:0022857
Lal11g0052 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Lal11g0052 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 332 - -
Lal11g0052 404 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Lal11g0052 404 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Lal11g0052 404 PANTHER WAT1-RELATED PROTEIN 12 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0052 Lal-Chr11 374493 378396 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0052 11 336 Nodulin-like Gene Family AT1G25270 42.945 5.69e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0052 - - gmx:100798755 583.563