Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0032 ATGAGGGTTTTTCATGTTATGATGTTTCCTTTGTTTTGTGCACTATTTCTATCTATGACTATGAGTTCACTATATTCAGCAGCACCTAACCCTTCACCCTCTTCCTCTTCATCCACATGTCCTATGGACCTTAACTATGCGTTAAGAATTCCATGGAACTCTTCTGTTTGCGAAAACTTTCATCCTTTGGTTTCCAAAAATGACACACACTCAAGCTCTTGTTGTCAAACTTTGTTGTCCCTTTTTGGTATAGGACTTGCACAGCACCTCAAAGTAACCTCTCATTTCAACTTACCTGATGTTTCTACCTCTTCCTTATGCCTTCAAGATTTCCAATCCATGCTCACTTCCCTTTCACTCCCTAATACCCTTGTCAATTCTTGCTTTGACCCTCTTCAGTTTGTTATCTCCCCTGATGTTTGTGCAAGTATACAAACTGTTCCAGATTGGATCAGCAAGGTTGGTAAGAACAAAGCACTTGAATCTGGATGCAAACCAGACCTTACTGATCTTTCTTTATGTGATGTGTGCCTCTCTGCAGGATTACAGGTCAAGCAGGAATTGATTTCAATTGATGGTAATGCTTCTCATTCCATAGATTGCTTTTACTTCACTATTCTTTATGCTGCTGGGTTTGTGAATGAGTTTGGACCTGAAAGCAATGGTGCTGTGACTTGCATTTTTGGTTTGTCTGTTTATTCACAAATTGGTTCTGGTGGAAAGGGTCATCAGGCTCTAGTGTTTGGGTTGACAGGAGCTGGAGTTGCACTGTTAGTAATGTGTTGTTTGTTGGGTTTGTATGTTTGGTATGATAGGAAGTATAAGAGAAAGAAGCTTAGAACTTTACAGTATGATTTTGACCCTGAGGAACAAGGGTCTAAGCCTAGAATGAGGCCTAATACAGGGTCAATTTGGTTCAAAATTGAGGAACTTCAGAAGGCTACTGATAAATTTTCAACTAAGAACTTCATAGGGCGAGGCGGGTTTGGATTGGTTTTCAAGGGAACATTGCCTGATGGAACCGTTGTTGCAGTGAAAAGGATTTTGGAATCTGATTTTCAAGGGGATGCCGAGTTTTGTAATGAGGTGGAGATTATTAGCAATCTGAAGCACCGTAATCTAGTGCCGCTTAGAGGGTGTTGTGTGGTTGATGAGAATGAGAATCCTGATGAGAGTGGAAGCCAAAGGTATCTAGTTTATGATTACATGCCCAATGGTAACTTGGAAGACCATCTCTTTTTATCTACAGACCCTCAAAAAGCGAATAAGTCATTGACTTGGCCTCAAAGAAAAGCCATAATCTTGGATGTGGCAAAGGGGTTGGCCTATTTGCACTATGGAATTAAGCCTGCAATTTTTCACAGGGATATCAAAGCCACCAATATACTACTTGATGCAGAAATGAGGGCAAGGGTTGCAGATTTCGGTCTTGCTAAACAAAGCAGGGAGGGTCAGTCTCATCTCACTACTAGAGTAGCCGGTACTCATGGATATCTAGCACCGGAATATGCACTCTATGGTCAACTAACTGAGAAAAGCGATGTCTATAGCTTCGGTGTGGTTGTTTTGGAGATAATGTGTGGGAGGAAAGCTCTGGATTTGTCTTCAACAGGTTTGTCGCGGGCATTCTTGATCACCGATTGGGCTTGGTCATTGGTAAAATCGGGGAATATAGAAGAGGCTTTGGATAGTTCATTGTTAAAAGATGGAGACTATCCTAGTTCAAATCCTAAGAGCATAATGGAAAGGTTTTTGTTGGTGGGAATTCTATGTTCTCATGTTATGGTTGCTTTGAGGCCAACAATTTCTGATGCTTTGAAAATGCTTGAAGGTGATACCGAGGTTCCAACAATCCCGGATCGGCCTATGCCTCTCGGGCACCCTTCATTTTATGCTAATGATGGCAATACTTTTAGCATTTCCCCTGCATTAAGTGGCCCAAAATTGCAAGCTGTAGGCATGCTCAGGTAA 1971 0.4155 MRVFHVMMFPLFCALFLSMTMSSLYSAAPNPSPSSSSSTCPMDLNYALRIPWNSSVCENFHPLVSKNDTHSSSCCQTLLSLFGIGLAQHLKVTSHFNLPDVSTSSLCLQDFQSMLTSLSLPNTLVNSCFDPLQFVISPDVCASIQTVPDWISKVGKNKALESGCKPDLTDLSLCDVCLSAGLQVKQELISIDGNASHSIDCFYFTILYAAGFVNEFGPESNGAVTCIFGLSVYSQIGSGGKGHQALVFGLTGAGVALLVMCCLLGLYVWYDRKYKRKKLRTLQYDFDPEEQGSKPRMRPNTGSIWFKIEELQKATDKFSTKNFIGRGGFGLVFKGTLPDGTVVAVKRILESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVVDENENPDESGSQRYLVYDYMPNGNLEDHLFLSTDPQKANKSLTWPQRKAIILDVAKGLAYLHYGIKPAIFHRDIKATNILLDAEMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSTGLSRAFLITDWAWSLVKSGNIEEALDSSLLKDGDYPSSNPKSIMERFLLVGILCSHVMVALRPTISDALKMLEGDTEVPTIPDRPMPLGHPSFYANDGNTFSISPALSGPKLQAVGMLR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0032 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Lal11g0032 656 Gene3D Transferase(Phosphotransferase) domain 1 403 617 - -
Lal11g0032 656 SUPERFAMILY Protein kinase-like (PK-like) 295 610 IPR011009 -
Lal11g0032 656 Gene3D Phosphorylase Kinase; domain 1 287 402 - -
Lal11g0032 656 ProSiteProfiles Protein kinase domain profile. 318 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0032 656 CDD STKc_IRAK 324 611 - -
Lal11g0032 656 SMART serkin_6 318 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0032 656 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 32 653 - -
Lal11g0032 656 Pfam SPARK 35 202 IPR043891 -
Lal11g0032 656 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 653 - -
Lal11g0032 656 Pfam Protein kinase domain 319 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0032 656 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0032 Lal-Chr11 224757 234084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0032 35 656 Receptor kinase-like Gene Family AT1G11050 63.242 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lal11g0032 Pkinase 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0032 - - gmx:100806560 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0032 11 224757 234084 Lal11g0032 11 224757 234084 ECH