Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0010 ATGGGAGGAGAAAGTGGGGGTGTGGAAGAATCATCATCATGTTGTTCTTCTCCAAAAAACAAAGTGAAGTTTTTGTGTAGCCATGGAGGAAAAGTTCTTCCTCGTCCCTCTGATGGCACCCTCAAGTATGTAGGTGGCGAAACCCGTGTCATTTCTGTCCCCCGTGACATCACTTTCTCTGACCTTATGAAGAAGCTTAGTGAAATGGTGGAGGGTGACATGATCCTCAAGTACCAGCTGATGCCTGAAGATCTTGATGCTTTGGTCTCAGTTAGAACAGATGAAGATCTAAAGCACATGATTGAAGAGAACGGCCGACATGAAAATGAAGGAGCCCCATTGCTTCGGGCTTTCCTGTTCCCTTCCAAGCCAGTTTTGATAGAGAATCATGCAGCAGCAGCAACAGCAGCACTAGCATCATCATCATCATCATCAGAACCTTATGTGTTAGAGCAACGTTACATTGATGCCATCAATGGCATTATTCGTACTAGCCCCAAGATGAAACTTACTCCAATCAGAGCATCCAGCACTTGCTCTGCTTGTTCATCACCAAAATCCAGCTCTCCAGATGGTAATACTGCTGATTTGATCCATGAATCAACATTCCACCCTCCCGCCCGGCTTGCAATGCATAAAGTTAGAAGCTCTCCCAGTATTGCAAGCCTAAGCAACCTTCACAGCAGTCCAAGTATTCAACATGATCATAGTCACTATCAAAACCAGAACCAGAGCCATCACCTTGTTGGTTATCCCTCGTCATCGAGAACAGCAACAGCACAAGATGCACAAGCAGGTTTTGGGATGGCAAGGCCACCACCAATTATGTCATTGCCATTGGGGATGGGAGGGAAAATAGATATGAATAGGGGTACGGGCAGTGGTAATAGTAATGGCAATGGCTATAGCTATTATTATTCATCAAGCAGACCCCATAAAGTGTTTGCATACTATGATGACACTGCAGCAGCTTATGCTCCTCATCCTACGGTTGAAAGAGTCAACGTGCCTAGGAGTCCTAGAAAGAGTATATGGGAGTAG 1041 0.4534 MGGESGGVEESSSCCSSPKNKVKFLCSHGGKVLPRPSDGTLKYVGGETRVISVPRDITFSDLMKKLSEMVEGDMILKYQLMPEDLDALVSVRTDEDLKHMIEENGRHENEGAPLLRAFLFPSKPVLIENHAAAATAALASSSSSSEPYVLEQRYIDAINGIIRTSPKMKLTPIRASSTCSACSSPKSSSPDGNTADLIHESTFHPPARLAMHKVRSSPSIASLSNLHSSPSIQHDHSHYQNQNQSHHLVGYPSSSRTATAQDAQAGFGMARPPPIMSLPLGMGGKIDMNRGTGSGNSNGNGYSYYYSSSRPHKVFAYYDDTAAAYAPHPTVERVNVPRSPRKSIWE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0010 346 SMART PB1_new 36 122 IPR000270 GO:0005515
Lal11g0010 346 CDD PB1_UP2 25 120 - -
Lal11g0010 346 Pfam PB1 domain 41 120 IPR000270 GO:0005515
Lal11g0010 346 Gene3D - 42 120 - -
Lal11g0010 346 PANTHER OS05G0427100 PROTEIN 10 266 - -
Lal11g0010 346 SUPERFAMILY CAD & PB1 domains 37 125 - -
Lal11g0010 346 PANTHER OS05G0427100 PROTEIN-RELATED 10 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0010 Lal-Chr11 84079 85903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0010 21 170 MAP Kinase Kinase Kinase AT5G57610 45.033 2.33e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0010 - - aip:107638505 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0010 11 84079 85903 Lal11g0010 11 84079 85903 ECH