Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0004 ATGTGGCCTAAATGTAAAACTAGTGAATGGGTGAAGGGCAAATTGGTTGGATCAGGATCTTTTGGTACTGTCCACTTGGCTATGAGCAAATTCACCGGTGCACTTTTTGTTGTGAAATCAGCACATTTAGGTGCTGGACGTGAGGCTTTGGACAATGAGGTCAAAATCCTCAAGAGTTTAAGGTCATCCCCATATATTGTGCAATGTTTGGGGACAGAAGAAGAAGGCCAACGTAATAATAATAATAATCTCAATGTTTTTATGGAGTACATGGCAGGGGGTAGTTTGGCTGATGTGGCACGCAAATTTGGTGGGTCATTAAATGAAGAGGTGGTTAGGGTGTATACTAGAGAAATCCTTCTTGGGTTAAAGCACCTTCACCAACATGGAATTGTGCATTGTGACCTTAAGTGCAAGAATGTGCTCTTAGGATCATGTGGCAACATTAAACTTGCTGATTTTGGAAGTGCTATAAGGGTAACGGACTCAAAAGGTGACGATGGAGGTTTGAAAAATTGTCTGGTTTCTGTTGTTGGTGGAACTCCTCTATGGATGGCTCCTGAAGTGTTGAGGAATGAGATGCTTGATTTTTCTGCTGATATATGGTCCTTGGGATGCACTGTTATTGAGATGGCAACTGGAACTCCTCCTTGGGCTGGTGAGGTTTCTAATCCGATGGCTGCTATGCTCAGAATTGCGCATGGTGATGGAGTACCTCAGTTTCCAACTCATTTTTCAACGGGTGCTTTGAATTTCTTGAGCAAGTGTTTGGAGAGAGACCCACAAAAAAGATTTACCGCTGACGAATTACTTAACCATCCATTTATTTCAACAAGAACTTATTCTCATAAAGAATGTGCTTCTTCGCCGGCTAGTGTATTAGAGGTTCAAAATTTTGAAGATTTAGATGAATTAGAAATTCAAGAGGTGAATGATTTCTCAATCAGAAACTCGTTTGCATGTTGTGATGAATCTAAAGGGACAGCGATATGGCAACGGGAAGACAGCACACTTTTGTCATCAGGGAATTGGATTACTGTTAGATCAGGATGA 1053 0.4131 MWPKCKTSEWVKGKLVGSGSFGTVHLAMSKFTGALFVVKSAHLGAGREALDNEVKILKSLRSSPYIVQCLGTEEEGQRNNNNNLNVFMEYMAGGSLADVARKFGGSLNEEVVRVYTREILLGLKHLHQHGIVHCDLKCKNVLLGSCGNIKLADFGSAIRVTDSKGDDGGLKNCLVSVVGGTPLWMAPEVLRNEMLDFSADIWSLGCTVIEMATGTPPWAGEVSNPMAAMLRIAHGDGVPQFPTHFSTGALNFLSKCLERDPQKRFTADELLNHPFISTRTYSHKECASSPASVLEVQNFEDLDELEIQEVNDFSIRNSFACCDESKGTAIWQREDSTLLSSGNWITVRSG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0004 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Lal11g0004 350 Pfam Protein kinase domain 12 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0004 350 SUPERFAMILY Protein kinase-like (PK-like) 5 293 IPR011009 -
Lal11g0004 350 Gene3D Transferase(Phosphotransferase) domain 1 5 332 - -
Lal11g0004 350 SMART serkin_6 10 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0004 350 CDD STKc_MAPKKK 9 276 - -
Lal11g0004 350 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 349 - -
Lal11g0004 350 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Lal11g0004 350 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 5 349 - -
Lal11g0004 350 ProSiteProfiles Protein kinase domain profile. 10 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0004 Lal-Chr11 57264 58316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0004 9 279 MAP Kinase Kinase Kinase AT2G32510 41.758 9.28e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal11g0004 Pkinase 3.6e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0004 K20716 - gmx:100798237 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0004 11 57264 58316 Lal11g0004 11 57264 58316 ECH