Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0002 ATGGCTTCAAATCATACTTCTGCTCCAGGGGCAACCAATGATGCTTTATACAAGGAATTGTGGCATGCCTGTGCTGGGCCACTTGTCACTCTTCCTCGTGAAGGGGAGAGGGTTTATTACTTCCCTCAAGGTCATATGGAACAGCTGGAGGCATCTATGAATCAGGGATCAGAGCAGAAAATGCCTTCCTTTAATCTGCCTTCTAAAATATTATGTAAAGTGGCTAATGTTCATCTAAAGGCTGAACCTGAAACTGATGAAGTGTATGCACAAATAACTTTGCTTCCTGAACCTGATGTTAGTGCTTTCTCTTATTCTTTATTTGATGTGCAAAGTGAGGTGACTAGCCCTGATGATCCACTGCCTGAACCTTCAAGGTGTACAGTCCATTCGTTTTGTAAGACCCTTACTGCTTCGGACACCAGCACTCATGGAGGTTTCTCTGTTCTTCGAAGACATGCGGATGATTGTCTTCCACAACTGGATATGTCTCAACAACCACCATGGCAAGAATTGGTTGCAACTGATTTGCATGGGAATGAATGGCATTTTCGACATATTTTTCGAGACAGAGTAATTTTCAGGGCAGCCCAGGCGCCATTTACTGACCACTGGGTGGAGTGTCTTTGTCAAGGGGAAAATGGAGAGCTGCGAGTTGGAGTCAGGAGGCTCATGAGGCAGCAAAGCAACATGCCATCTTCCGTTATATCTAGTCATAGTATGCATCTTGGTGTTCTGGCCACTGCATCTCATGCTATTGCTACTGGAACACTGTTTTCTGTATTTTACAAGCCCAGAACAAGCCGGTCAGAATTTGTTGTAGGTGTCAACAAGTATCTTGAAGCTCGAAGTCATATACTTTCTGTTGGGATGAGATTCAAAATGAGATTTGAGGGTGATGAAGTTCCTGAAAGAAGGTTCAGCGGCACAATTGTCGGTGTTGAAGATAATAAATCATCAGTCTGGGCTGATTCTGAGTGGCGATCATTAAAAGTTTGTCTACTGTTTTAA 1011 0.4352 MASNHTSAPGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGSEQKMPSFNLPSKILCKVANVHLKAEPETDEVYAQITLLPEPDVSAFSYSLFDVQSEVTSPDDPLPEPSRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPQLDMSQQPPWQELVATDLHGNEWHFRHIFRDRVIFRAAQAPFTDHWVECLCQGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFVVGVNKYLEARSHILSVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSSVWADSEWRSLKVCLLF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0002 336 CDD B3_DNA 130 191 IPR003340 GO:0003677
Lal11g0002 336 Pfam Auxin response factor 249 331 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal11g0002 336 SUPERFAMILY DNA-binding pseudobarrel domain 121 252 IPR015300 -
Lal11g0002 336 Gene3D - 129 225 IPR015300 -
Lal11g0002 336 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 332 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal11g0002 336 Gene3D - 286 334 - -
Lal11g0002 336 PANTHER AUXIN RESPONSE FACTOR 1 13 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0002 Lal-Chr11 41120 47480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0002 2 332 B3 DNA Binding Superfamily AT1G59750 73.256 1.86e-178 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0002 K14486 - gmx:100793224 555.444