Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1310 CAGCTTGCCTTCTATACTGGACCAACCGTTGGAGGTCTACTCAATGCAACATTTGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGAAAAACGGTATGATTAGGGTTGTTCAACAATCTTTACTTGGTTCAATCTTGTCAAATATGCTTCTAGTTCTTGGCTGTGCTTTCTTCACTGGTGGGATTGTCCACCACAAGAAAGTTCAGACAGCTGCTGTTGTCAATTCTGGCTTGCTGTTGATGGCTGTTATGGGGTTACTCTTTCCTGCTGTGCTTCACTTTACTCACTCAGAGGTTCATTTTGGGAAGTCAGTCTTATCTCTATCAAGATTCAGCAGCTGTATAATGTTAGTGGCGTATGCCAGCTACCTTTTCTTTCAACTCAGAAGTCAGCAAAATCTTTATAGTCCTGTTGATCAGGTAGCAGATAATAGTGAAATTTCTGACGAGGAAGAACTTGAATTAAGTAAATGGGAAGCAATAGTCTGGCTTGCTATTTTGACTGCATGGGTATCTGTATTGTCTGGATACCTTGTAGATGCCATAGAGGGAGCATCTGAGTCAATGAATATGTCAATGGCCTTTATTAGTGTCATCTTGCTTCCAATTGTTCAATGTCTCCATAGGATATCACAATTGGAGTTGCTGTTGGATCATCTACGGAGATATCTATGTTTGTGGTATAGACTTGAACTGCTAATCCCCTTCTGTGTGGTTGTCGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTCGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTTGCATTTATGATGCAGGAAGGAACGTCAAATTATTTCAAAGGCTTGATGCTTATTCTGTGCTATCTTATAGTTGCTGCCAGTTTTTTTGTACATGTAGACCCTCAAAATGGTGAGTTTACTGAGAATATACTTAATAGGTTTATAATAGATTATATAATGTGGCAGAAAGCTTGTTGA 984 0.3923 QLAFYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHKKVQTAAVVNSGLLLMAVMGLLFPAVLHFTHSEVHFGKSVLSLSRFSSCIMLVAYASYLFFQLRSQQNLYSPVDQVADNSEISDEEELELSKWEAIVWLAILTAWVSVLSGYLVDAIEGASESMNMSMAFISVILLPIVQCLHRISQLELLLDHLRRYLCLWYRLELLIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPQNGEFTENILNRFIIDYIMWQKAC 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1310 327 PANTHER VACUOLAR CATION/PROTON EXCHANGER 1 311 - -
Lal10g1310 327 Pfam Sodium/calcium exchanger protein 7 130 IPR004837 GO:0016021|GO:0055085
Lal10g1310 327 Gene3D - 233 299 IPR044880 -
Lal10g1310 327 Gene3D - 8 214 IPR044880 -
Lal10g1310 327 TIGRFAM cax: calcium/proton exchanger 2 298 IPR004798 GO:0006816|GO:0015369
Lal10g1310 327 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 311 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1310 Lal-Chr10 19111090 19113452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1310 1 306 Antiporters AT3G13320 69.062 5.24e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1310 K07300 - gmx:100806000 468.003