Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1307 ATGTTGCTTCTATATTCCCCTCTTTCTCCATTCGTATGTGATGGAAAGGGATGGAAACTGTGCTTTGAAGACTTTATTTCAGGTTTAGGAGTGAACATAGTGACTATTGTTATGATTGTTGTGATTGGATTTAATCACAAGATTGTTAGAGGACAAGGACTTCAGAGATCACATGCCCAGAGGACACCTCTGGAGAAATTGTTCCTGGATTTTGTACCAGCCATTGGAGCATGTCTTTCAGTCTTGGACATGATATTTCTGTGGAAGAAAGAACATAATAGCCATTTTGTTGGGTATAGTATGTGGTTTTATAGCTGTTCTGAGTTGATCATATGGACAAATATCATTCTCTTCTCAAATTTCTCCAGCACTCACTATGCAGTCTTCAACCATGTATTATGCTATTGGTGGATCCTGAAAACAATATCAGCAGTCTATCATTTAATAACAAAGTTTCCATCACTTGAGGTTTCAATATGCATAATAGAAAGCTTAGTTGTTCTCTTGAATATCACATTTGGCATAGCTATCAATGTGATCAGGACAAAGATACAACCTTCCAAAAGCAGTCCAATGGAAGATCCACTTCTTTTCAATAATGTGGACCTTGAGGAAGGTGGCCATAGTGACCTTGGAAATAATGAGAACTTTTGGGATTTGATGACATTCAAATTCATAACTCCAGTAATGAATCATGGTGTGGTAAAACAATTAGACTCTGAAGATCTGCTGCAGCTACCTAGTGACATGGGACCTTCTTCCTGTCATGAACTAATTTCATCATGCTGGCAAGCTCAGTTGAGTAATAATGTTTCAAACCCATCATTGTTTAGAGCACTTTGTAGTGCATATGGATGGCCATATCTCCGCCTGGGTTTACTCAAGATGATTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTCAATAAGCTCATCAAGTCTCTTCAACAAGGTTCAGTGAGTGTGGATGGGTACTTACTTGCAATGTCTATGGGTCTCACCTCTATAATTAAATCATTTTTAGATACACAATATACTTTTCATCTTTCCAAACTGAAGCTAAAGCTGCGATCTAGTATCATGACTCTAATCTATGAGAAGTGTCTATGTGTGAACCTGGCAGAGCGTTCAAAATTCACAAATGGAGAAATTCAGACATTTATGTCAGTAGATGCTGACCGAACTGTCAACTTGTGTAATAGTTTCCATGATCTGTGGAGCTTGCCTTTACAAATAGGAGTGGCGCTTTATCTTCTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCAATAACCATTTTATTGATACCAGTGAATAAATGGATATCAAAATTGATTGCAAGGGCCACAGAGCAAATGATGAAGGAGAAGGATGAAAGGGTTCGCAGGACGGGAGAACTTTTGACTTATATTCGCACTTTGAAGATGTATGGATGGGAACTCCTTTTTTCTAGTTGGTTGATGGAGACAAGATCATTGGAAGTGAAACAGCTATCTACTCGGAAATACTTGGATGCATGGTGCGTATTCTTTTGGGCTACAACACCAACACTCTTTTCTCTTTGTACATTTGGACTCTTTGCATTGATGGGACATCAGCTTGATGCTGCCATGGTTTTTACTTGTCTTGCTTTGTTTAACACACTGATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCCATTATATCCTCTAGACGGCTGAGTAGGTTTCTCTCTTGTCCTGAACATAAAGTGGGAGAGATCAGTTATTGTTCATTCACGTTCCCGAGTAAACAGCCTGATTCTGTACAAGATCCGGTTGTCAGATTCGAAGATGCATGCTGTACTTGGTCAAGCGGTGATGAACAAACATTAAATTTGGTTTTGAATCATGTGACACTAAGCCTATCCAGGGGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCAGGTAAGTCATCCCTGTTATATTCAGTTCTTGGAGAAATGCGGCTTGCTCATGGATCTGTTTATTCCAATGGATCCATAGCTTATGTACCACAGGTTCCCTGGATTTTATCTGGAACTATTCGTGACAACATATTATTTGGGAAAGACTATGATCCTGAAAGGTATGCAGATACATTGCAAGCATGTGCATTAGATGTTGATATCTCATTGATGGTTGGAGGTGACATGGCTTATATTGGCGAGAAAGGAGTGAACTTATCGGGTGGACAGAGAGCTCGTCTTGCTTTGGCAAGGGCAATGTATCATGGCTCAGATGTTATTATGCTTGATGATGTCCTGAGTGCAGTAGATGTACAAGTTGCTCAATGGATTTTACGTAATGCCATTTTAGGTCCTCTTATGCGGGGGAAAACACGATTGCTATGTACCCACAACATTCAGACAATATCTTCTGCTGATATGGTTGTTGTAATGGATAAAGGACATGTGAAGTGGATGGGAAGTTCAGCTGAATTTCCGATTTCTTCATATACAGCATTATCCCCAATGAATGAAATGGATTCATCTTTACAGAATCACACACAATCTTTAAACACAAATTTGTCTTCCAAATCCAAGGAGCAACCTCTTCCTGATAAAGTTATTATGCATGCTCTGGATAGGCCAGAGGAAGTAATTGAAGTTGAGTCAAGGAAAGAGGGTAAAGTCGAACTTGGTGTGTATAAGAACTATGCTGTCTTCACTGGCTGGTTCACCACAGTTATTATATGCCTGTCAGCTATTTTGATGCAAGCTACTCGTAATGGAAATGATTTATGGCTGTCATATTGGGTTGATTCGACAACAGAAAGCGGTCAAACAAAATATTCTCTGTCCTTCTATCTGGGTATACTTTGTCTCTTATGTATTATGAATTCCTTTTTCACACTGGTGAGGGCATTCTCTTTTGCATTTGGGGGCATACAAGCAGCAAATAAGGTGCACAATAAACTGCTCAGCAAGCTCATCAATGCACCTGTCCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTGTCTTCAGATCTTTACACAATTGATGATTCTCTTCCGTTCATGTTGAACATTCTCCTAGCTAATTTTGTAGGGCTGTTGGGCATTGCAATAATTTTGTCATATGTACAGTCCTGCTATTACCATTTTGGTATATCTACAGTAAACTCCAGGTCAACATCAAGAGAATTACGACGACTGGATAGTGTTTCACGTTCTCCAATATATACATCTTTCACTGAGACACTTGATGGATCATCAACTATCAGGGCATTTAAATCTGAGGACTTTTTCTTTGCCAAATTCACTGAACACATAACATTGTATCAGAAGACTTCCTACACAGAGACAGTGGCAAGTTTATGGCTTTCCTTGCGTCTTCAGTTATTAGCTGCATTTATCGTCTCATTCATAGCTCTTATGGCTGTTGTTGGATCTCATGGCAGCTTGCCTATCAACTTCGGTACCCCGGGGCTGGTTGGATTGGCCCTCTCTTACGCAGCACCTATTGTATCCTTGTTGGGGAGTTTTTTAACAAGTTTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGCTCTTCAGTACATGGACATTCCTCAAGAAGAACAAGCTGGATGCCTAAAGTTGAATCCATATTGGCCAAATGAAGGAGTTATTGAATTCCACAATGTTACTTTGAAATATATGCCATCTTTGCCAGCATCACTTAGCAATCTTAGTTTTACAATTGCACGAGGAATGCAGGTCGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTTACCCCAGTATGTACAGGCTCTATCACAATTGATGGCATGGACATTAAAAATATTCCTGTCAGAGACCTACGTGCGCGTTTGGCTATTGTTCCTCAGAGTCCTTTCCTTTTTGAAGGATCATTAAGAGATAATCTGGATCCATTCAAAATGAATGATGACTCAAAAATTTGGAATGCATTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAATGGCTGGAGGGCTGGATATTCTCATAAAGGAAGCTGGGATGTCATTTTCTGTTGGCCAGCGGCAACTCCTTTGCCTTACACGTGCACTTCTCAAATGTTCAAAGGTTCTCTGTTTGGATGAATGCACTGCCAATGTAGACATTCTAACTGCTTCACTGCTGCAAAGTACTATATCCAGTGAATGCAAAGGCATGACAGTGATCACAATTGCTCACAGGATTTCAACTATTCTAAGTATGGATAATGTTCTTATTCTTGACCACGGGAGCCTGGTTGAACAAGGAAATCCACAAGTTCTTCTGAAGGATAACTTCTCTATATTTTCCAGTTTTGTTAAAGCTTCATCGATGTAA 4374 0.3971 MLLLYSPLSPFVCDGKGWKLCFEDFISGLGVNIVTIVMIVVIGFNHKIVRGQGLQRSHAQRTPLEKLFLDFVPAIGACLSVLDMIFLWKKEHNSHFVGYSMWFYSCSELIIWTNIILFSNFSSTHYAVFNHVLCYWWILKTISAVYHLITKFPSLEVSICIIESLVVLLNITFGIAINVIRTKIQPSKSSPMEDPLLFNNVDLEEGGHSDLGNNENFWDLMTFKFITPVMNHGVVKQLDSEDLLQLPSDMGPSSCHELISSCWQAQLSNNVSNPSLFRALCSAYGWPYLRLGLLKMINDCIGFAGPLLLNKLIKSLQQGSVSVDGYLLAMSMGLTSIIKSFLDTQYTFHLSKLKLKLRSSIMTLIYEKCLCVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDLWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISKLIARATEQMMKEKDERVRRTGELLTYIRTLKMYGWELLFSSWLMETRSLEVKQLSTRKYLDAWCVFFWATTPTLFSLCTFGLFALMGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAIISSRRLSRFLSCPEHKVGEISYCSFTFPSKQPDSVQDPVVRFEDACCTWSSGDEQTLNLVLNHVTLSLSRGSFVAVIGEVGSGKSSLLYSVLGEMRLAHGSVYSNGSIAYVPQVPWILSGTIRDNILFGKDYDPERYADTLQACALDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAMYHGSDVIMLDDVLSAVDVQVAQWILRNAILGPLMRGKTRLLCTHNIQTISSADMVVVMDKGHVKWMGSSAEFPISSYTALSPMNEMDSSLQNHTQSLNTNLSSKSKEQPLPDKVIMHALDRPEEVIEVESRKEGKVELGVYKNYAVFTGWFTTVIICLSAILMQATRNGNDLWLSYWVDSTTESGQTKYSLSFYLGILCLLCIMNSFFTLVRAFSFAFGGIQAANKVHNKLLSKLINAPVQFFDQTPGGRILNRLSSDLYTIDDSLPFMLNILLANFVGLLGIAIILSYVQSCYYHFGISTVNSRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDFFFAKFTEHITLYQKTSYTETVASLWLSLRLQLLAAFIVSFIALMAVVGSHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEEQAGCLKLNPYWPNEGVIEFHNVTLKYMPSLPASLSNLSFTIARGMQVGIIGRTGAGKSSVLNALFRLTPVCTGSITIDGMDIKNIPVRDLRARLAIVPQSPFLFEGSLRDNLDPFKMNDDSKIWNALEKCHVKEEVEMAGGLDILIKEAGMSFSVGQRQLLCLTRALLKCSKVLCLDECTANVDILTASLLQSTISSECKGMTVITIAHRISTILSMDNVLILDHGSLVEQGNPQVLLKDNFSIFSSFVKASSM 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1307 1457 SMART AAA_5 1246 1436 IPR003593 -
Lal10g1307 1457 SMART AAA_5 640 814 IPR003593 -
Lal10g1307 1457 Gene3D ABC transporter type 1, transmembrane domain 872 1204 IPR036640 GO:0005524|GO:0016021
Lal10g1307 1457 CDD ABC_6TM_MRP7_D2_like 905 1197 - -
Lal10g1307 1457 Gene3D - 1205 1454 IPR027417 -
Lal10g1307 1457 CDD ABC_6TM_MRP7_D1_like 291 576 - -
Lal10g1307 1457 Gene3D - 595 858 IPR027417 -
Lal10g1307 1457 ProSitePatterns ABC transporters family signature. 738 752 IPR017871 GO:0005524
Lal10g1307 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 610 837 IPR003439 GO:0005524
Lal10g1307 1457 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 906 1185 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal10g1307 1457 SUPERFAMILY ABC transporter transmembrane region 279 584 IPR036640 GO:0005524|GO:0016021
Lal10g1307 1457 SUPERFAMILY ABC transporter transmembrane region 902 1202 IPR036640 GO:0005524|GO:0016021
Lal10g1307 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1212 1444 IPR027417 -
Lal10g1307 1457 Gene3D ABC transporter type 1, transmembrane domain 277 584 IPR036640 GO:0005524|GO:0016021
Lal10g1307 1457 Pfam ABC transporter transmembrane region 906 1147 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal10g1307 1457 Pfam ABC transporter transmembrane region 292 556 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal10g1307 1457 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 261 1438 - -
Lal10g1307 1457 CDD ABCC_MRP_domain1 610 813 - -
Lal10g1307 1457 CDD ABCC_MRP_domain2 1218 1437 - -
Lal10g1307 1457 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 293 568 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal10g1307 1457 Pfam ABC transporter 631 763 IPR003439 GO:0005524
Lal10g1307 1457 Pfam ABC transporter 1237 1384 IPR003439 GO:0005524
Lal10g1307 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1220 1453 IPR003439 GO:0005524
Lal10g1307 1457 PANTHER MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 261 1438 - -
Lal10g1307 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 608 824 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1307 Lal-Chr10 19066345 19082298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1307 630 859 Calmodulin-binding Proteins AT2G36910 28.968 6.26e-21 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1307 K05674 - gmx:100814181 2375.51