Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal10g1296 | ATGGAGTTGCCTTTGTTCACAAGGCATGTTATCAAGGTTATGACCAACTTGCTGTTGTTCCTCTTGGTTTTCTCAGCAACTACTATTGCAAATTCTACTCTTTCTTCTTCTTCTTCAAAACCAAGTGTTGTGAAAATTGGAGCATTATTTACTCTTAATTCTGTCATTGGAAGATCAGCTAAACCTGCAATCATGGCTGCTGTTCATGATGTTAATGCTAATACCACCATTCTCCCTGCCATTAAGTTGGAAGTTATTTTACATGATACTAATTGCAGTGGTTTTCTTGGAACAGTAGAAGCTCTGCAGCTGATGGAGAATGATGTGGTTGCTGCAATTGGTCCACAGTCTTCGGGAATAGCCCATATAATCTCTCAAGTTGCTAATGAACTTCATGTTCCTCTTATTTCATTTGGTGCAACAGACCCTTCTCTATCTTCACTTCAATTCCCTTATTTCATCAGAACCACTCAGAATGACTATTTCCAAATGCATGCAATTGCTGACTTTGTCGATTACTATAAATGGAGGGAGGTAATAGCCATCTTTGTAGATGATGATAATGGAAGGAATGGAGTTTCTGTATTGGGAGATGCTTTGGCACAAAAACGTGCAAAGATTTCTTTTAAGGCTGCTTTCACTCCTGCTGCACCCAAAAGTGATATCACTGACTTGTTAACTAGAGTTAACTTAATGGAATCACGCATCTATGTTCTTCATGTTAATCCTGATTCCGGTTTGGAAATTTTCTCTATTGCCAAGAAGCTAGGAATGATGACAAGTAGTTATGTGTGGATTGCCACGAATTGGCTTCCTTCGGTGTTGGATTCATTAGAGAACGTTGACACAATGAATCTCTTACAAGGTGTTGTTGCTTTTCGTCACCACACACCAGATACTAATCTCAAAAGGAGTTTTATCTCTAGGATGAAAAGCCTTAAAGACAAGGAGACTAAAAACTTCAATTCTTATGCACTATATGCATATGATTCTATTTGGTTAGCAGCACATGCTCTTGATGTTTTTCTCAATGAAGGTGGAAACATATCTTTCTCATCTGATCCTGTGTTGCATAACACAAATGGAAGCATGTTGCATTTATCATCGCTTCGTGTTTTCAATGGCGGCCAACAGTTTCTGCAGACAATTTTGAGAACAAACTTCACCGGTATCAGTGGTCAGATTCAGTATGATACGGATAAGAATTTAATCCATCCAGCATATGATATTCTGAATATCGGCGGATTTGGATCACGTAGAATTGGTTATTGGTCTAATTACTCTGGTCTCTCTGTTATAGCTCCAGAAATTTTGTATGAGCAACCACCTAACACTTCAACAAGTAATCAACAACTGTACAGTGTTATATGGCCTGGAGAGACTACAAACACACCAAAGGGGTGGGTATTCCCTAACAATGGAAAGCCACTAAGGATAGCAGTGCCTAACAGAGTTAGCTATTTGGACTTTGTTTCGGAGGACAAGAACCCTCCTGGTGTAGAAGGCTATTGCATTGATGTCTTTGAAGCAGCCATAAACTTGTTGCCTTATCCTGTCCCGCGACAGTATATGCTATTTGGAAACGGTGATATAAATCCTGACTATAACAACCTTGTGTATCAGCAGAAATTTGATGCAGCTGTTGGAGATATTACAATAGTGACAAACAGGACAAGGTTTGTGGATTTTACTCAACCTTACATGGAATCAGGGCTGGTTGTTGTTGTTCCTGTGAAGGAGATAAAGTCAAGTGCTTGGTCTTTCCTCAAGCCATTCACTGCTCAAATGTGGTGTGTTACAGCTGCCTTATTTCTTTTTGTGGGAATTGTTGTATGGATTCTTGAGCGCAGGCACAATGACGAGTTTCGTGGTACACCAAGGCAACAACTCAACACAATTTTATGGTTTACTTTCTCAACAATGTTTTTCGCACACAGAGAGAATACTGTGAGTAATCTTGGGAGAGTAGTGCTGATCATATGGCTTTTTGCAGTGCTAGTAATCACTTCAAGCTATACAGCTAGCTTAACATCCATCCTCACAGTGCAACAACTTTCATCAGAAATTGAAGGCATTGATAGCTTGATATCAGATACTCAACCAATTGGAATTCAAGAAGGGTCATTTGCAAAGAAGTATCTCATAGATGAACTCAATATAGCACCATCTAGGATAGTTTCTTTGAAAAACCAGGATGCATATATCGATGCCCTTACGCGTGGACCCAAAAATGGAGGGGTTATGGCAATTGTTGATGAGCTTCCTTATATTGAAATCTTCATGTCCAATACAAACTGTCAATTCAGAATAGTTGGGCAGGAGTTCACAAGAAGTGGTTGGGGATTTGCATTCCAGAGGGAATCTCCTCTTGCTGTTGATATGTCAACAGCAATTCTCCAACTAGCTGATAATGGTAATTTGCAAAAGATTCATGACAAGTGGCTTTTGAGAAATGTTTGTGTTGCACAAGTCAGTAATGATCAATCATATAAACTATCTCTGAGTAGCTTCTGGGGACTCTTTCTTATTATTGCCATTGCATGTTTCCTTGCCTTGACTGTATTCTTTATTAAAGTGATGTGTCAATATAAGAAATTCAGCACTGGTCATGAAATTCAACCACACCAAATGAATTGCTTCAAGGGCTTGATCGATTTTATGGATAAGAGAGAAGAAGATGTCAAAGAGATATTTAGACAAAAAAATACTACAAAATCTGATGAGCAATCAACTTCACATATCTAA | 2745 | 0.3883 | MELPLFTRHVIKVMTNLLLFLLVFSATTIANSTLSSSSSKPSVVKIGALFTLNSVIGRSAKPAIMAAVHDVNANTTILPAIKLEVILHDTNCSGFLGTVEALQLMENDVVAAIGPQSSGIAHIISQVANELHVPLISFGATDPSLSSLQFPYFIRTTQNDYFQMHAIADFVDYYKWREVIAIFVDDDNGRNGVSVLGDALAQKRAKISFKAAFTPAAPKSDITDLLTRVNLMESRIYVLHVNPDSGLEIFSIAKKLGMMTSSYVWIATNWLPSVLDSLENVDTMNLLQGVVAFRHHTPDTNLKRSFISRMKSLKDKETKNFNSYALYAYDSIWLAAHALDVFLNEGGNISFSSDPVLHNTNGSMLHLSSLRVFNGGQQFLQTILRTNFTGISGQIQYDTDKNLIHPAYDILNIGGFGSRRIGYWSNYSGLSVIAPEILYEQPPNTSTSNQQLYSVIWPGETTNTPKGWVFPNNGKPLRIAVPNRVSYLDFVSEDKNPPGVEGYCIDVFEAAINLLPYPVPRQYMLFGNGDINPDYNNLVYQQKFDAAVGDITIVTNRTRFVDFTQPYMESGLVVVVPVKEIKSSAWSFLKPFTAQMWCVTAALFLFVGIVVWILERRHNDEFRGTPRQQLNTILWFTFSTMFFAHRENTVSNLGRVVLIIWLFAVLVITSSYTASLTSILTVQQLSSEIEGIDSLISDTQPIGIQEGSFAKKYLIDELNIAPSRIVSLKNQDAYIDALTRGPKNGGVMAIVDELPYIEIFMSNTNCQFRIVGQEFTRSGWGFAFQRESPLAVDMSTAILQLADNGNLQKIHDKWLLRNVCVAQVSNDQSYKLSLSSFWGLFLIIAIACFLALTVFFIKVMCQYKKFSTGHEIQPHQMNCFKGLIDFMDKREEDVKEIFRQKNTTKSDEQSTSHI | 914 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal10g1296 | 914 | PIRSF | IGluLR_plant | 11 | 913 | IPR017103 | - | |
| Lal10g1296 | 914 | Gene3D | - | 159 | 430 | - | - | |
| Lal10g1296 | 914 | SUPERFAMILY | Periplasmic binding protein-like I | 39 | 469 | IPR028082 | - | |
| Lal10g1296 | 914 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 539 | 815 | IPR001638 | - | |
| Lal10g1296 | 914 | CDD | GluR_Plant | 475 | 815 | - | - | |
| Lal10g1296 | 914 | Gene3D | - | 708 | 819 | - | - | |
| Lal10g1296 | 914 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 57 | 73 | - | - | |
| Lal10g1296 | 914 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 117 | 145 | - | - | |
| Lal10g1296 | 914 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 328 | 340 | - | - | |
| Lal10g1296 | 914 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 661 | 683 | - | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal10g1296 | K05387 | - | gmx:100799912 | 1332.01 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal25g0048 | 25 | 347623 | 352789 | Lal10g1296 | 10 | 18999932 | 19003564 | LSH | |
| Lal10g1296 | 10 | 18999932 | 19003564 | Lal8g0038 | 8 | 338652 | 344515 | LSH | |
| Lal9g0385 | 9 | 2543834 | 2549545 | Lal10g1296 | 10 | 18999932 | 19003564 | PCT |
Showing 1 to 3 of 3 entries