Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1292 ATGTCTTCCTCAAAGCTCATTAGCACTATGCTCTTCTCACTAACCTTATCTCTCATTCTCCAATCCTCTTTTGGAGCTGACCCTCTCTTCCATTTTTGTTCAAACTCTGAAAACTTCACAGCTAACAGCCCATATGAAACAAACTTAAAAACACTTATCAACTCACTTATCTACAAGACCCCTTCAACAGGTTTTGGTATTGGCTCAGTTGGCCAATATCAAAACCAACCAGCATATGGTCTTGCCCTATGCCGTGGTGATGTTTCAACCTCAGAATGTAAAACTTGTGTTTCTGAGGCATCCAAAGAAATCCAAAACCGTTGTCAATACAACAAAGGTGGTATTATATGGTATGACTATTGCATGTTCAAGTACTTGGACACTGATTTCTTTGGCAAGATTGACAACACAAACAAGTTCTATATGTGGAACTTGAATAATGTAAGTGACCCTGCCACTTTTAACTACAACACTAAAGAGTTATTGAGCCAACTTGGTCAAAAAGCTTCTGTTAACACTAAATTATATGCAACCGGAGAGGTGAAGCTTGATAAATCAAAGAAACTTTATGGATTGACTCAGTGCACTAGGGAACTTTCAAGCATTGATTGCAAAAAGTGTCTTGATGATGCAATTAGCGAACTTCCAAATTGTTGTGATGGAAAAGAAGGAGGCAGAGTTGTGGGTGGAAGCTGCAACTTCAGATATGAAATATATCCATTTGTCAAAGAATAA 735 0.381 MSSSKLISTMLFSLTLSLILQSSFGADPLFHFCSNSENFTANSPYETNLKTLINSLIYKTPSTGFGIGSVGQYQNQPAYGLALCRGDVSTSECKTCVSEASKEIQNRCQYNKGGIIWYDYCMFKYLDTDFFGKIDNTNKFYMWNLNNVSDPATFNYNTKELLSQLGQKASVNTKLYATGEVKLDKSKKLYGLTQCTRELSSIDCKKCLDDAISELPNCCDGKEGGRVVGGSCNFRYEIYPFVKE 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1292 244 Pfam Salt stress response/antifungal 147 238 IPR002902 -
Lal10g1292 244 Pfam Salt stress response/antifungal 33 125 IPR002902 -
Lal10g1292 244 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
Lal10g1292 244 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Lal10g1292 244 PANTHER DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED 1 243 - -
Lal10g1292 244 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 1 243 - -
Lal10g1292 244 Gene3D - 135 241 IPR038408 -
Lal10g1292 244 Gene3D - 26 130 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1292 Lal-Chr10 18986798 18987532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1292 29 243 Pollen Coat Proteome AT4G20670 40.625 1.20e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1292 - - gmx:100527155 448.358