Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1267 ATGGATAAAAGCTATATTCTGAATTTTCTCCTCCTCATCCTCCATTTAAGTGAAACACAAGCTGCATTTGGTGTAGGTGTTGGTGTTGGCAGTGGTGGTGGAGTGGTTTGGGTTGGTGGAGGGATTAACAGTCCAGAGCCACCTAGATCTTCATTGCCAAAGCTGAATGGAGCTTACACTGCTCTTCAAGCTTGGAAATCTGCAATTACTGATGACCCTCTAAAGATTTTAGATACTTGGGTTGGTCCTAATGTGTGTTCTTACAAAGGAGTCTTTTGTTCAGATCCTCAAGATGAAATGGTTTCATCAAATGTACTTGTTTCAGGCATAGATCTCAACCATGCAAATCTCCAAGGAACTCTTATTAAAGATCTCTCTTTACTCACTGATATGTCTCTTCTCCACCTCAACAGTAACAGGTTCACTGGCAATGTTCCTGATACATTCAGAGACCTCACATCATTGGAAGAGTTAGACCTTAGCAACAACCAACTTTCAGGTCCTTTTCCTTCTGTCACTTTATACATGCCAAGCCTCATCTACTTGGACATCAGATTCAACTCCTTCTCAGGTTCCCTCCCTCAAGAACTTTTCAATAGGAATCTTGATGCAATATTTGTCAACAACAATCAATTTGAAGGAGAAATACCTCAAAACTTGGGTAATTCTCCTGCCTCAGTGATAAATTTAGCCAACAACAAGCTCAGTGGAAACATTCCAGCAAGTTTTGGCTTCATGGGTTCTAAATTAAAAGAGATTCTCTTCCTTAATAACCAGTTAACTGGTTGCATTCCTGAAGGAGTTGGGCTATTCACAGAGATGCAAGTTCTGGATGTGAGCTTCAATTCACTCATGGGCCATGTTCCTGACACACTATCTTGCCTGCAAGATATACAAGTCCTTAATTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATTTACTATGCTCTATGAGAAGCCTTGCAAATCTAACAGTTGCTTACAATTTCTTCTCTGGGTTCAGCCAGGAATGCTCAAAGCTTTTCTTTAGGAATATTGGTTTTGATTTTTCACTTAACTGCATTCCTGGAAGGGACATGCAAAGACCTCAACCTGAATGCTCTATGATACCAGGTGGTAGCCTAAGTTGTATCAGAATCCCTACACCAAACCCTCTTGTTTGTGGTGCCTTGGCTGTAAGTAGTACCACTAAGAACACTGATCACAGTTCACCATCTCCTTGA 1227 0.4099 MDKSYILNFLLLILHLSETQAAFGVGVGVGSGGGVVWVGGGINSPEPPRSSLPKLNGAYTALQAWKSAITDDPLKILDTWVGPNVCSYKGVFCSDPQDEMVSSNVLVSGIDLNHANLQGTLIKDLSLLTDMSLLHLNSNRFTGNVPDTFRDLTSLEELDLSNNQLSGPFPSVTLYMPSLIYLDIRFNSFSGSLPQELFNRNLDAIFVNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKLKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHVPDTLSCLQDIQVLNLAHNKLSGELSDLLCSMRSLANLTVAYNFFSGFSQECSKLFFRNIGFDFSLNCIPGRDMQRPQPECSMIPGGSLSCIRIPTPNPLVCGALAVSSTTKNTDHSSPSP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1267 408 Gene3D Ribonuclease Inhibitor 223 346 IPR032675 -
Lal10g1267 408 Pfam Leucine rich repeat 133 188 IPR001611 GO:0005515
Lal10g1267 408 ProSiteProfiles Leucine-rich repeat profile. 154 175 IPR001611 GO:0005515
Lal10g1267 408 Gene3D Ribonuclease Inhibitor 58 222 IPR032675 -
Lal10g1267 408 PRINTS Leucine-rich repeat signature 155 168 - -
Lal10g1267 408 PRINTS Leucine-rich repeat signature 295 308 - -
Lal10g1267 408 PANTHER LRR/EXTENSIN 1 408 - -
Lal10g1267 408 Pfam Leucine rich repeat N-terminal domain 58 94 IPR013210 -
Lal10g1267 408 SUPERFAMILY L domain-like 58 341 - -
Lal10g1267 408 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1267 Lal-Chr10 18856083 18857309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1267 53 380 Leucine-rich Repeat extension Gene Families AT3G24480 48.204 5.22e-104 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1267 - - gsj:114407518 660.218