Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1263 ATGACCACATTTTGCTTTTGTTACATGCTCAGCAAGCTCTATTTTAACCTATCTGCAGATAAGGGAAAAACAACTTTGGATAACCAAGGTGGAAATCAACAAAATGGAGATGCAGAAGCAAAATCCCTCCTTGTGGAGAAACTTGGCAAAAAAGTGAGTGCTGAAGGGAAAAGTTGTCCCAAAAATCACAAGGGAGAGTGCACTGAAGAATGTCTACATATAGAGTCCTCAAGAGAAAACCAGGCCAATAGTGAGAATGCACTTGATTTGGAGAAAGATAGCAAGTCAAAAGAAGCTTCCCTTAACCAAACACAATTGGAAACAAACAAGCTTAAGAGAGACATTTCCAATAAAGTTAATAAGCATAATGATAGTTTGGAGAACGATTTACTACTCAAGTTTCAGGGAGATTTAGATGTCGGGAGGAAAAAACTCCTTCAAACTTCCAACCAGAAACCTAGATTGACAAAATCAGAGTCATTTCCTTTAACATATTTAATGATGAGAAACATAAGTTCTCCTACCTTTAGACACAAGCAAACTGAAATTTGGACCTCCTCCAAGGGAGAAAAGTTGCTTGTCGGTACTCAATCACAAAAAATGTCTGCATCTAGTTTTGTGGAAGATATTTCTTATGAGAAGCAAACGAAACAAAAAGAAAACATTTTTTCACGGTCTTATCAAGGATCAAATCACAAAGGGTGGAATCAAATGGTTGTTCATAGCTTCAGAGTTATAAAGCAGAAGATAAAAAATGCTCTTGCCGAAGCAGTCTACCACAAAGCTTCACCTGAAGATAGTATTAACAATGATGAGAAAGAGGTCTCACAAATCTTAGATGATGGTGTGAATCGAGAGTACGCAAAGAATGAAAGCTCAAATGAAATTAAAACGTCGGATTATGCTTCCAACAAAGATGAAGCTTGCCTCATCCAAAGAGCATCCTCCCTAGATGGATCACTAGACAGATATACTCAGTTGTTTGAGAAAATCTTCAGCAATGATGTCAATAAGTATAAATGCTTAAATTTAATAAATGAAGATAAGGTTCTCAAGAGTGAAAGTGCTCCTAAGTTTTGCAGAAGAAATTACTCTCTGCCTAGTCTCGAGTCTTTAGGCTTCATCCTACATGAGATACTTCGTGATAAGAATTTAGGGGATAGATTGGAAGGTGATAATCATGTTAAAAGAAAATCACTGAGTTCTTCTTTACAAACTGACAAATCACTTGATCAGATTGAAGAGACTGAAATCGTGGAAACAGTAGAAGGAGATGGCAGAGATGTGAATTCTGGTCTTTTATCTGGTAAGATTGTAGAGAAAATTGATGAAGGAATTGCCTCCATGAAAGCATTGGAAGATAGAAGTTTCCTCCATGAAAATGTGGAAATAAGTAGGACTATATATCCTAGCAAGGAAGTAGTAGCATCTTTTGAAGCTAGCTGTGAAGACAATATAACCATCCACACAGAAGGTAGAGAATTGAATCCGCAAAGCTCTAGCATGGAAGAATTGGAGAGTGGTTTAGCAAAAAGAGGAGGTATAGATTATTTTGAAGTCTCTTTACCCAACACAAATGTTACTGTAACAGCAAAAGACACAAACATGAGAGTTGAGAACCATTTCCTGCTCCATAAATCAGTTACAGAGAATGATTCCAATTTCAAATACGTGAAAAAGATTCTTGAAGTTTCTGGCTTCATGGGAAATGAGCAGAATCAAATGTGGCACACATTAGAGCAGCCTCTAAAGCTTTCCTTACATAAGGATTTGGATAATGAAAATGAATCTTATGGAGAAGAGATTTCAAGCCTCTATGATCAGCAGCTTCTATTCGACTTAGTTAAAGAGGTGCTCCTTGAAATAGATGAGATATCACCAATTTACTTCCCTATACCCTTCTCCTTCAACAACAAAACCGGTCCAATGCTTAAGGGGCACTATCTTCTTAATTATGTATGGACTACTGTTAACTCATACCTGAGCTTGAGACCAGAACTAGATCAGACATTAGACGATGTTATAAGTCGCGATTTGGCTAAGGGAAGGGTCTGGATAAACCTCCAACAGGAAGTGGAGTATGTTGGACTTGAACTTGAAGAGATGATTATGGATGATTTATTAGATGAACTCGTCTTCTCATGA 2145 0.373 MTTFCFCYMLSKLYFNLSADKGKTTLDNQGGNQQNGDAEAKSLLVEKLGKKVSAEGKSCPKNHKGECTEECLHIESSRENQANSENALDLEKDSKSKEASLNQTQLETNKLKRDISNKVNKHNDSLENDLLLKFQGDLDVGRKKLLQTSNQKPRLTKSESFPLTYLMMRNISSPTFRHKQTEIWTSSKGEKLLVGTQSQKMSASSFVEDISYEKQTKQKENIFSRSYQGSNHKGWNQMVVHSFRVIKQKIKNALAEAVYHKASPEDSINNDEKEVSQILDDGVNREYAKNESSNEIKTSDYASNKDEACLIQRASSLDGSLDRYTQLFEKIFSNDVNKYKCLNLINEDKVLKSESAPKFCRRNYSLPSLESLGFILHEILRDKNLGDRLEGDNHVKRKSLSSSLQTDKSLDQIEETEIVETVEGDGRDVNSGLLSGKIVEKIDEGIASMKALEDRSFLHENVEISRTIYPSKEVVASFEASCEDNITIHTEGRELNPQSSSMEELESGLAKRGGIDYFEVSLPNTNVTVTAKDTNMRVENHFLLHKSVTENDSNFKYVKKILEVSGFMGNEQNQMWHTLEQPLKLSLHKDLDNENESYGEEISSLYDQQLLFDLVKEVLLEIDEISPIYFPIPFSFNNKTGPMLKGHYLLNYVWTTVNSYLSLRPELDQTLDDVISRDLAKGRVWINLQQEVEYVGLELEEMIMDDLLDELVFS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1263 714 MobiDBLite consensus disorder prediction 76 116 - -
Lal10g1263 714 PANTHER PROTEIN TRM32 25 714 - -
Lal10g1263 714 Pfam Domain of unknown function (DUF4378) 555 710 IPR025486 -
Lal10g1263 714 PANTHER PROTEIN TRM32 25 714 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1263 Lal-Chr10 18836744 18839177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1263 521 712 TRM (TON1 Recruiting Motif) Superfamily AT1G07620 39.000 1.90e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1263 - - lang:109351072 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1263 10 18836744 18839177 Lal10g1263 10 18836744 18839177 ECH
Lal25g0145 25 903915 923760 Lal10g1263 10 18836744 18839177 LSH