Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1245 ATGGAAAAGTTGTTGGATAAGTTATCGCCGATGGATCTAATGCGATCCGAGAAGATGAGCTTCGTTCAGCTCATAATCCCCGCCGAGTCTTCTCACCGTGCCATTTCCTATTTAGGACAACTCTCTCTCCTTCAATTCCGCGACTTAAATGCCGATAAAAGCCCCTTCCAGAGGACATTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTTCGATTCTTCAAGGATCAAATCAATAAAGCTGGTTTAATGTCTTCCTCTCATCCTGTATTGCAACCGGACATTGATTTAGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAATAGTGACAAACTCCGGCAATCATATAACGAACTTCTGGAATTCAAGATTGTATTGCAGAAGGCTTGTGGTTTTCTTATTTCAAGTCATGGTCGTGCTGTTTCAGAAGAGAGAGAACTACAAGAGAATGTATACTCAAATGATGAATATGTTGAGAATGCATCTTTACTTGAACAGGAAATGGGGCCTTGGCCAGCAAACCAATCTGGTTTAAGATTTATCAGTGGCATAATTTGTAAATTGAAGATTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACCAGAGGCAATATGCTTTTCAATCAAGCACCAGCTGATGAACAAATCATGGATCCTGTTTCAACTGATATGATAGAGAAAACAGTTTTCGTTGTCTTTTTCTCCGGGGAACATGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAATGAAGCAGAGGCAAATAACTAGAGAGGTTTCATCACGCCTTACTGATTTAGAGGCAACTTTGGATGCTGGGATTAGGCATCGAAATAAGGCTCTAGCTTCTATAGGGGTTCATGTAGAACAATGGATGAGCATGGTAAGAAGAGAGAAAGCCGTGTATGACACTCTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTCGGAGAGGGCTGGTGCCCTATATTTGCAAAAACACAGGAGGCACTGCAACGTGCATCTTTTGATAGCAGTTCTGAAGTTGGCATAATCTTCCATCCAATGGATTCAGTGGAATCACCACCTACATATTTTAGGACCAACAGTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCGAGATACCAAGAAGCAAATCCTGCAGTGTACACAACTATTATATTCCCCTTCTTATTTGCAGTGATGTTTGGAGACTGGGGTCATGGAATTTGCCTGCTGCTGGGAGCACTAGTTCTTATAGCTCGTGAAAACAAGCTTAGCACTCAGAAACTTGGAAGCTTTATGGAGATGCTATTCGGCGGGCGCTATGTGCTTCTTTTGATGTCACTATTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTTTCTGTTCCTTTTCACATATTTGGTGCATCTGCTTATAAATGCCGAGATAGTTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATACCAAGAGCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTGAATTCTTTGAAGATGAAGATGTCCATTCTGTTTGGTGTGGTGCATATGAACTTAGGAATTATATTAAGTTATTTCAATGCTCGCTTCTTTGGAAGCTCACTGGATATAAGGTACCAGTTTGTGCCACAGGTGATTTTCCTCAACAGTCTATTTGGGTATCTTTCCTTTCTCATTGTTGTTAAGTGGTGTACAGGCTCACAGGCAGACCTTTATCATGTTATGATATACATGTTTTTAAGCCCAACAGACAACCTTGGTGATAATCAGTTGTTCTGGGGCCAGAGACCACTTCAAATTGTGTTATTGCTTTTGGCTTTAATTGCAGTTCCGTGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTTATACTGAGAGATTTCAAGGTCGCAGTTATGGTTTGCTTAATAACTCCGAGATAGACCTTGAGGTAGAGCCAGATTCTGTCAGGCAACATCATCATGAAGAATTCAGTTTCACAGAGGTCTTTGTTCACCAGATGATCCACTCCATTGAGTTTGTTCTAGGTTCCGTTTCGAATACAGCTTCATATCTTCGACTTTGGGCATTAAGTTTGGCTCACTCGGAACTTTCTACTGTCTTCTATGAGAAAGTCTTGCTTCTTGCTTGGGGGTATGATAATCTTGTTATTCGGTTAGTGGGGCTAGCTGTTTTTGCCTTTGCAACTGCCTTCATATTACTAATGATGGAAACTCTTAGTGCTTTTCTTCATGCCCTACGTCTTCATTGGGTAGAATTTCAAAATAAATTCTACCATGGTGACGGCTACAAGTTCAAGCCTTTTTCCTTCGCCTCCTTAACTGATGATGATGATTGA 2457 0.4029 MEKLLDKLSPMDLMRSEKMSFVQLIIPAESSHRAISYLGQLSLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSSHPVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLISSHGRAVSEERELQENVYSNDEYVENASLLEQEMGPWPANQSGLRFISGIICKLKILRFERMLFRATRGNMLFNQAPADEQIMDPVSTDMIEKTVFVVFFSGEHARTKILKICEAFGANCYPVPEDIMKQRQITREVSSRLTDLEATLDAGIRHRNKALASIGVHVEQWMSMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQEALQRASFDSSSEVGIIFHPMDSVESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTIGLVKYQEPYPFGVDPSWRGSRSELAFLNSLKMKMSILFGVVHMNLGIILSYFNARFFGSSLDIRYQFVPQVIFLNSLFGYLSFLIVVKWCTGSQADLYHVMIYMFLSPTDNLGDNQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLYTERFQGRSYGLLNNSEIDLEVEPDSVRQHHHEEFSFTEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFASLTDDDD 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1245 818 PANTHER VACUOLAR PROTON ATPASES 6 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lal10g1245 818 Coils Coil 100 127 - -
Lal10g1245 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
Lal10g1245 818 PANTHER VACUOLAR PROTON ATPASE A1 6 818 - -
Lal10g1245 818 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1245 Lal-Chr10 18715753 18726640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1245 1 811 Primary Pumps ATPases(2) AT2G28520 79.387 0.0 1343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1245 K02154 - gmx:100776037 1491.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1245 10 18715753 18726640 Lal10g1245 10 18715753 18726640 ECH
Lal10g1245 10 18715753 18726640 Lal8g0130 8 897059 907354 LSH