Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1226 ATGAGCAGCACAAGGCCTGAATCTCATGTAGCACAACAAATTCGCCGCGATAAATTGAGAATCCAGGACAGCTCCCATAATCATCTACAAGAATTCCATAACAATAACCCGGGACAATTGTCATCACACCAAGGGTTCAACTTAGATCAAGTTAGGAATGTTAGAAATGCCAACATACTTGTTGTTGAACCTGTAACTGAATATTCTTCATCAGAAATGGCTAATTTTTCAAATCCTTTGTCTACTCCAAGGAATAACAATACATTGCAGTGTCAGGAACTAGGAGAAGATGAACCTGCTATTAAAGTAATGATGCATCAGTTTCCCAGTTCATCTATCAGTTTGGGAAATTGGAGAAACAGTGCCACCCATCAAGGTGTTGATTGGAATGTTTTAAATTATGCAAGCAGTTCTATGTCCAGTGAAAGCAATCAAAACTCTTTTTTGGCTTCTGAGATCAATAATAACGTGTCTGTTAATTACCAGCACTTTGGAAAGCCTAGTTACAATGAACTCACAGAAACACAACCTTCTTCTCTTAGTAGAGAAATTCAAAAGAAATTAGGTGTAAACGTAATGCATCATCAAACTTCTTCATCATATCAGAATGCCTTGCAGGATATTGTGAAGTCTTCAGCTTCTATTAGTAGCGCCTGCAATGGTTCAGACATGGCTTCATTGATGCAGCAAACTGGTCAAAACATTTGGGTCGGGGATGCAAATGAACTTGCACAACTTCATCCAAGTTATTCAAATCAACAAAATCGGCAATCACATTTTACGTGTGGTAATTTGTGGACTAATAGACCTCTCCCAAGTGATTCTACTCCTCAAAGTTTGTCCTTGTCACTTTCATCAAATTCACAATCCAAGCCTTTTGTTTCTCATTTTGAAGAGGCTTCTGCTTCTGCTTCTGCATTTGCATCAGATCATTGCATTTCTAAGGAACCTCCTAAACATGTGAAGCCATCTATCATTTCTAGAGATTGTGGTAAATCACCACTTCAAGACTATGTAGGGATATTGCCTAATTCAAACAATACCAGTTATCGAAATGTGGGTCCTCTTGGCCCTTTCACTGGTTATGCTACTATTCTCAAGAGTTCAAGATTCTTAAACTCTGCTCAACAACTGTTAGAAGATTTCTGCTGTGTTTCTGATTCAAGATTTGCAAATGTATTTGATGTTCCAAATAGGGTCTCTGAAGAAATTAGTGCTTCTACTTCTGCTGATGATGTTACTGTCATTGAAACTAGAGGGGTTGCTCCAAAAGGTGGTAACTTAGGTTCTTCATCTTCTATGTTGTATAGTGCAAATGAAAATATCACTGATAGAGGAACTTGGAGTAGCTTTGGTCTTTCTCCAACGCCTGATTATCAACAGAAGAAGGCAAAGTTACTATACATGCAAGAGGAGGTTGGCTGGAGATACAAGCAGTACCATCATCAAATGCAAATGGTTGTTACATCTTTTGAGTCAGTAGCGGGTCTTAGTTCCGCTACTCCTTATGTATCCTTGGCTCTCAAGTCAATATCAAGACACTTCAGGTGCCTTAAAAATTCAATCTCAGATCAGCTTAAGCTTATAACTGAAGTCTTGGGAGATGACTTGTCCATTCCAACCACCGGTACTAGTTGTAAAGTCGACAATAATATCACAAATCGAAGGTGCATGGACCAAAGATTTCAAAAGAACAAAGGTATCAGGAATAACAAGGGCCTTCTTGAACCCCAACAGCTTGTGTGGAGGCCCCAGAGAGGCTTGCCAGAACCTGCAGTGGCAATCCTTAAAGCTTGGTTATTCGAGCATTTTCTTCATCCTTACCCCACAGACAATGATAAGCACATGTTGGCTACTCAAACTGGTCTATCACGAAACCAGGTATCAAATTGGTTCATAAATGCTCGAGTACGTGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAACAAAAGGCAGAACAGATGAAAACCAGAAAACTAATGAAAATGAAAGAAGTGAAGGTGGTACCAGCAACCCTAGAATGGATAAACCTCTGAGCAAGTTTGGCATGCAGTCAATCCCTGAAAGCCAATTTCAGTGCACGGAAATGGGTTCAAGCATAGCTGAAGAAAACGGTTTAAATCATGAAGATCAACAATGGAGTCAAGAGAAGAGGTCTAAGTTTGAATTCCAGCTGAGTAGGAACTCAAGCATGCATGGGACAGTGATGGGTTTTGTGCCTTACCAACAACGTGGTGGAGTTGAGGTTGAAGGACTTGGATCTGTGTCACTAACATTGGGTCTTAGACATGGTGTTGAAGGTGTACAAAACCAACAACAATTACAAGAGGAACAACTTATACGTCATTTTGGTGGGCATATATATGATCCTTCACATTGTTGA 2391 0.3986 MSSTRPESHVAQQIRRDKLRIQDSSHNHLQEFHNNNPGQLSSHQGFNLDQVRNVRNANILVVEPVTEYSSSEMANFSNPLSTPRNNNTLQCQELGEDEPAIKVMMHQFPSSSISLGNWRNSATHQGVDWNVLNYASSSMSSESNQNSFLASEINNNVSVNYQHFGKPSYNELTETQPSSLSREIQKKLGVNVMHHQTSSSYQNALQDIVKSSASISSACNGSDMASLMQQTGQNIWVGDANELAQLHPSYSNQQNRQSHFTCGNLWTNRPLPSDSTPQSLSLSLSSNSQSKPFVSHFEEASASASAFASDHCISKEPPKHVKPSIISRDCGKSPLQDYVGILPNSNNTSYRNVGPLGPFTGYATILKSSRFLNSAQQLLEDFCCVSDSRFANVFDVPNRVSEEISASTSADDVTVIETRGVAPKGGNLGSSSSMLYSANENITDRGTWSSFGLSPTPDYQQKKAKLLYMQEEVGWRYKQYHHQMQMVVTSFESVAGLSSATPYVSLALKSISRHFRCLKNSISDQLKLITEVLGDDLSIPTTGTSCKVDNNITNRRCMDQRFQKNKGIRNNKGLLEPQQLVWRPQRGLPEPAVAILKAWLFEHFLHPYPTDNDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGRTDENQKTNENERSEGGTSNPRMDKPLSKFGMQSIPESQFQCTEMGSSIAEENGLNHEDQQWSQEKRSKFEFQLSRNSSMHGTVMGFVPYQQRGGVEVEGLGSVSLTLGLRHGVEGVQNQQQLQEEQLIRHFGGHIYDPSHC 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1226 796 MobiDBLite consensus disorder prediction 651 684 - -
Lal10g1226 796 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 39 768 - -
Lal10g1226 796 SUPERFAMILY Homeodomain-like 584 648 IPR009057 -
Lal10g1226 796 Gene3D - 585 647 - -
Lal10g1226 796 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 39 768 - -
Lal10g1226 796 SMART prehox3 360 524 IPR006563 -
Lal10g1226 796 CDD homeodomain 582 643 IPR001356 GO:0003677
Lal10g1226 796 MobiDBLite consensus disorder prediction 651 665 - -
Lal10g1226 796 Pfam Associated with HOX 365 523 IPR006563 -
Lal10g1226 796 ProSiteProfiles 'Homeobox' domain profile. 601 642 IPR001356 GO:0003677
Lal10g1226 796 SMART HOX_1 582 646 IPR001356 GO:0003677
Lal10g1226 796 Pfam Homeobox KN domain 599 638 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1226 Lal-Chr10 18599503 18605023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1226 341 766 Homeobox Transcription Factor Family AT4G34610 34.879 6.52e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lal10g1226 POX 9.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1226 - - gmx:100790583 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1226 10 18599503 18605023 Lal10g1226 10 18599503 18605023 ECH
Lal25g0192 25 1291563 1295496 Lal10g1226 10 18599503 18605023 LSH
Lal10g1226 10 18599503 18605023 Lal2g0302 2 1777878 1782884 PCT
Lal2g0302 2 1777878 1782884 Lal10g1226 10 18599503 18605023 PCT