Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1214 ATGTCTCAGGAATGCATGAAAGTACCAGAATGGGTAGAACATGTTTTGTCTAGTACATTTTTCTCAGCATGTGAAATCCACACCAAACACAGGAATGAATGTAATAAGTACTGCATCGATTGTACGGACGATGCATTCTGTTCTCATTGCGTTCCAACTAGCCATAAGGGCCATCATGTTATTCAAATAAGGAGGTCATCATATGAAGAATGTGTGAGAGTGGAAGATCTTCAGAAAGCTTTAGATATCAATGGAGTTCAGACATTTGTGATAAATAGTGCTAAAGTTATTTTTCTAAACAAAAGAGGTCGTTGTGTGTCTCAGACCAAAAACAATGGTGGTGGTAATTTAAGAAACAACCTTTGCAAAAACACAACTGAGTGTATGACATGTCAACGAACTCTCCTAGAACCCTTTTGTTTCTGCTCAATAGAATGCAAGTTTGAATGGATAAAGAAGGATGAGAGTGGGAAATTCTTCTTAAGTGTAAAAAATGAAGAAGAAATGGCAACATTGACATCAAAAGAAAAGGACATAGAGTTGGAAGAAGAAACCAACAAAGAAATATTCCAAAGTGGGATTGATCGTCCTCCTGCTAGGCCAGTTTCCTACAATTCAAGGAAAAGAAAGGGAATACCTCGTAGGGCACCCTTTTTTTAA 660 0.3742 MSQECMKVPEWVEHVLSSTFFSACEIHTKHRNECNKYCIDCTDDAFCSHCVPTSHKGHHVIQIRRSSYEECVRVEDLQKALDINGVQTFVINSAKVIFLNKRGRCVSQTKNNGGGNLRNNLCKNTTECMTCQRTLLEPFCFCSIECKFEWIKKDESGKFFLSVKNEEEMATLTSKEKDIELEEETNKEIFQSGIDRPPARPVSYNSRKRKGIPRRAPFF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1214 219 MobiDBLite consensus disorder prediction 190 219 - -
Lal10g1214 219 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 218 - -
Lal10g1214 219 Pfam PLATZ transcription factor 64 147 IPR006734 -
Lal10g1214 219 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 218 - -
Lal10g1214 219 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1214 Lal-Chr10 18521146 18522101 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal10g1214 PLATZ 3.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1214 - - lang:109342505 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1214 10 18521146 18522101 Lal10g1214 10 18521146 18522101 ECH