Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1210 ATGGAAGAGGACCGAACTGAGGAGAGTGATTACAGTTCAGAGGACGAAGGAACTGAGGATTACAGGCGTGGAGGGTACCACGCAGTTCGTATTGGCGACACTTTCAAGAATGGGTGCTATGTGGTGCAGAGTAAACTTGGTTGGGGTCATTTTTCCACTGTCTGGCTTGCTTGGGATACTCACAAATCGCGGTATGTTGCCCTAAAAATTCAAAAGAGTGCTCAGCACTACACCGAAGCAGCAATGGATGAAATAAAGATTCTCAAGCAGATTGCAGGAGGTGATCCAGATGACAAGAAATGTGTTGTCAAGCTATTGGATCACTTTAAGCATTCAGGGCCCAATGGTCAGCACGTGTGTATGGTTTTTGAATTCCTAGGTGACAATCTTCTTACCCTTATAAAGTACAGTGATTATCGAGGGGTTCCCCTTCCCATGGTTAAAGAAATTTGTTTCCATATTTTGGCTGGTTTGGATTACTTGCATCGCGAGCTCTCTATAATACACACTGATTTGAAGCCCGAGAATGTCCTGCTTCTGTCTCCAATAGATCCATCTAAGGATCTAAGAAAATCAGGTGTTCCACTTGTCCTTCCAAACACCAAGGACAAGACTGTGCCCAAGATTGTGATCACAAAAGATGATAAAAGTTTAAATGGAGATCTGACCAAGAACCAGAAAAAGAAAATGCGAAAAAAGGCTAAAAAGGCAGCTCAAGGCTGTGTTGGGAAGGAAAGACCCGAGGAAGCTGAGGAGGATTCTAAAGCACCTGAGCAAGATGATTGTAGTAATGATGTGAAACCAACTGTAGAATCTGGTGAAGGTAAACCTAATAGTCATGTGAATAAAGATGAATCTGCAGAGGTTTCTGAAACTAAGGATGTTCCACAAGGAAGTGGTGGTCGTAGGAGAGTTAGCAGTTCTACAAGAAAGAAGTTGCTGACAGCTGTTGATCTCAAGTGCAAGTTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACGAGGCAGTATCGGTGTCCTGAGGTTATTCTTGGATCTAAATACTCAACTCCAGCAGATCTATGGTCTTTTGCTTGCATTTGCTTTGAGCTTGTCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGCAAGATTGCACTAGGTGGTCGCTATTCCCGGGACTTTTTCAACAGATCTGGTGATTTGAGGCACATCCGCCGGCTGCGTTTCTGGCCTCTTAATAAGGTGCTGACAGAGAAATATAATTTCAGTGAGCAAGAAGCAAATGACATGGCTGATTTCCTTGTTCCATTACTTGATTTTGTCCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAGTCATCCATGGTTTAGTGCTGGTCCTCGGACTCTTGAACCCTTGTTGACTACTGTGCAACCTGATGCTACAGTTGCAGAAATGTCTGAAAAGATGAAGAGGGAAAAGGCCGAGCTGGAGGCTGTGGAAGTTGGTGTGGAGAACATAGCTATTAGTGGAACTCCAAAGCCACTCAAAGAGTCCCAACCAATAAGGTCATCAAAATAG 1635 0.4361 MEEDRTEESDYSSEDEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTHKSRYVALKIQKSAQHYTEAAMDEIKILKQIAGGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICFHILAGLDYLHRELSIIHTDLKPENVLLLSPIDPSKDLRKSGVPLVLPNTKDKTVPKIVITKDDKSLNGDLTKNQKKKMRKKAKKAAQGCVGKERPEEAEEDSKAPEQDDCSNDVKPTVESGEGKPNSHVNKDESAEVSETKDVPQGSGGRRRVSSSTRKKLLTAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELVTGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRSGDLRHIRRLRFWPLNKVLTEKYNFSEQEANDMADFLVPLLDFVPEKRPTAAQCLSHPWFSAGPRTLEPLLTTVQPDATVAEMSEKMKREKAELEAVEVGVENIAISGTPKPLKESQPIRSSK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1210 544 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 541 - -
Lal10g1210 544 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Lal10g1210 544 MobiDBLite consensus disorder prediction 218 307 - -
Lal10g1210 544 MobiDBLite consensus disorder prediction 238 267 - -
Lal10g1210 544 MobiDBLite consensus disorder prediction 1 20 - -
Lal10g1210 544 MobiDBLite consensus disorder prediction 1 15 - -
Lal10g1210 544 ProSiteProfiles Protein kinase domain profile. 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1210 544 PANTHER SERINE KINASE-LIKE PROTEIN 8 541 - -
Lal10g1210 544 Pfam Protein kinase domain 317 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1210 544 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1210 544 SUPERFAMILY Protein kinase-like (PK-like) 35 494 IPR011009 -
Lal10g1210 544 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Lal10g1210 544 CDD STKc_SRPK 29 481 - -
Lal10g1210 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Lal10g1210 544 MobiDBLite consensus disorder prediction 277 291 - -
Lal10g1210 544 SMART serkin_6 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1210 544 Coils Coil 501 521 - -
Lal10g1210 544 Gene3D Transferase(Phosphotransferase) domain 1 123 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1210 Lal-Chr10 18489222 18493779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1210 6 532 EF-hand Containing Proteins AT5G22840 69.533 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Lal10g1210 Pkinase 2.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1210 K08832 - gmx:100791829 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1210 10 18489222 18493779 Lal10g1210 10 18489222 18493779 ECH
Lal25g0215 25 1469459 1474263 Lal10g1210 10 18489222 18493779 LSH
Lal10g1210 10 18489222 18493779 Lal8g0169 8 1143400 1146829 LSH