Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1207 ATGGCTTTAACTTCGCCACTACTTCTTCACTTTCCTTCTCACTTCTTCTCCGATCCTCTACCGTTATCCCCACCTACTTTTCTACTCCGCCGTACCAACTTCTCCGTTCTCTCTCCACCAAAGCCTCTTATCAATTCCCTCTCTTCCTCCGTCAAATGCTTAACCAGATCCACCGATAACCAACACTGCAGTCACAATGAAACTGCCTTATCGGATTCCGGTGAAGCTTTAAACGGTGAAAATGATCACACTCCCACACCAACCTCTGCTCCTTCCAACAACCGTTTTGAGTCTCACAGAATTGCTTCTTCATCTTCTACTGATTCTCTTTCACTTGGAATTCGAGAACCTGTTTATGAAGTTGTTGAAGTGAAGGTAGATGGGACAGTATCAACTAGAAAAATCAACAGGAGACAGCTTTTGAAGTCAAGTGGTCTTCGTCCACGTGATGTTCGAAGTGTGGATCCATCGTTGTTTATGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATACTTCTAAATCTGGGTTCACTGCGAGCAATAGCTATGCAAGATTGTGTACTTATATTTGACTATAATCGTAAAGGAGGGAAAGCGTTTCTAGAGTCATTGCTGCCTCGGTTGAACCCCAAGAACACCAACGGAGGGCCATCAATGCCTTTTGAACTCGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGTTTGGAGGGTAGACTGATGGACTTAGAACCTCGTGTGAGTATGGCAATGCAGTCTGTTCAAGCTCTTATTGAGGCTGTGCCAAATCGGTTAACTGGTGACATATTAGAGCAACTTCGTATTAGCAAACAAACTCTGGTTGAGTTAGGCTCTAGGGCAGGCGCTCTCAGACAGATGCTGCTTGACCTTCTGGAGGACCCCAATGAAATACGCCGTATCTGCATTATGGGAAGAAACTGCACACTTAAGAAGGGAAACAATGATATGGAATGCTCAGTGCCCCTAGAAAAGCAGATTGCTGAGGAGGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGGCGTCAATTTGAGCTCACGGAGGCTTGAGGTTAGTAGAGTGGAACTGCTTCTCCAGGTTGGAACATTCTGTTTGGCAGTTGGTGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCATATCTTGAAGAACATGTGGTACTTTGCATTTTGGCTGACAACCGGTGGGATAATTGTTGGTGGCCTTATTGCTTTTTTTCTTATGTACACCTACCTCAAGGCAAGGAAAATATTTTGATTGGAAGAAACTTCAATTTAGGTAATAACATTCATTACCCTTTTAACCAATCTCCCCAGCAATACTGCTCTGAACATTCATTACCCTTTTAA 1464 0.4351 MALTSPLLLHFPSHFFSDPLPLSPPTFLLRRTNFSVLSPPKPLINSLSSSVKCLTRSTDNQHCSHNETALSDSGEALNGENDHTPTPTSAPSNNRFESHRIASSSSTDSLSLGIREPVYEVVEVKVDGTVSTRKINRRQLLKSSGLRPRDVRSVDPSLFMTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGKAFLESLLPRLNPKNTNGGPSMPFELEVVEAALLSRIQRLEGRLMDLEPRVSMAMQSVQALIEAVPNRLTGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPNEIRRICIMGRNCTLKKGNNDMECSVPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIGVNLSSRRLEVSRVELLLQVGTFCLAVGALVAGIFGMNLKSYLEEHVVLCILADNRWDNCWWPYCFFSYVHLPQGKENILIGRNFNLGNNIHYPFNQSPQQYCSEHSLPF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1207 487 MobiDBLite consensus disorder prediction 59 104 - -
Lal10g1207 487 Gene3D - 114 195 - -
Lal10g1207 487 CDD Mrs2_Mfm1p-like 121 430 IPR039204 -
Lal10g1207 487 Coils Coil 335 355 - -
Lal10g1207 487 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 46 427 - -
Lal10g1207 487 Gene3D Magnesium transport protein CorA, transmembrane region 196 386 - -
Lal10g1207 487 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 46 427 IPR039204 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1207 112 424 MRS2 Gene Family AT5G22830 82.428 5.71e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1207 K16075 - gmx:100807024 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1207 10 18482519 18488488 Lal10g1207 10 18482519 18488488 ECH