Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1195 ATGAAGGTTATTGCTGCTTATTTGTTGGCCGTATTGGGAGGCAATGAAACTCCTTCTGCTGCTGATCTCAAAAATATCCTTGGCTCAGTTGGAGCCGAGGCTGAGGAGGAGAAGATTCAGTTGCTCTTGAGCGAAGTGAAGGGCAAAAGTATTGTTGAACTAATTGCTAGTGGGAGAGAGAAGTTGGCTTCAGTACCATCCGGTGGTGGTGCCGTTGCTGTTGCTGCTGCCCCTGCTGGAGGTGCTGCTGGTGGTGGTTCCGCACCTGCTGCTGAAGCAAAGGAGGAGAAGAAGGTAGAAGAGAAGGAGGAGTCAGATGATTATACTCATGACTTTTTGCTGATGATATGTTATCTTTGTTCAACAGGACATGGGCTTCAGTTTATTCGACTAAAAGAGCGTATAGATAGAATTGCAACTACCACTGGAATCACTACTGAATTGTGA 447 0.4631 MKVIAAYLLAVLGGNETPSAADLKNILGSVGAEAEEEKIQLLLSEVKGKSIVELIASGREKLASVPSGGGAVAVAAAPAGGAAGGGSAPAAEAKEEKKVEEKEESDDYTHDFLLMICYLCSTGHGLQFIRLKERIDRIATTTGITTEL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1195 148 Coils Coil 91 111 - -
Lal10g1195 148 Hamap 50S ribosomal protein L12 [rpl12]. 2 107 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lal10g1195 148 MobiDBLite consensus disorder prediction 78 104 - -
Lal10g1195 148 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 107 - -
Lal10g1195 148 Gene3D - 1 59 IPR038716 -
Lal10g1195 148 CDD Ribosomal_P2 1 66 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lal10g1195 148 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 107 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lal10g1195 148 Pfam 60s Acidic ribosomal protein 18 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1195 Lal-Chr10 18408557 18412178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1195 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 72.857 7.53e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1195 K02943 - ming:122089001 112.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1195 10 18408557 18412178 Lal10g1195 10 18408557 18412178 ECH