Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1191 ATGGAGGTGCCATGGCAAAGTTTCTTCTCCGATATGGAAATGGAAGAGGGTAATTATTTCTATGATCAATGCGACAAGAACTCACTAGATGATCATGAATTTGTTCTTGGAAAGTTCATTCAACAATCAGGTTTATCATTTGAGAGTGAAAGTTTCTCTCCTCCAAATAATGGTGCAAGTTGTTTGTCTTTTGAGGAGACTACTACTATATCCAACAACCATGTCAAACTTATGAGCAAGAGCAGTAGCACCAACTCCATAGCATCTCATCAACATGTTCCACACAAAGTGTTCACTGCAAGTGCTAATGCTACTTCTCCAAAATCATATGTTCTTTCTTTTGATGACTCCAATGTTGTAGCAGCAGTAGAAGCTACTAGAGAATTAGGTAATGGGAGAAAGCACCAAGCTAATAACCGTGACCAATCAAAAGGGGATAACCAAACAAGTGTAAGGAAAAGTAGAAACTCTTCTGAGACTTTGGACCACATCATGGCTGAGAGAAAAAGGAGACAGGAATTGACTGAGAGATTCATAGCACTTTCAGCTACTATTCCTGGCCTGAAGAAGATTGACAAGGCTTCAATACTTAGTGAAGCAATAACTTATGTCAAACAACTTCAGAAACGAGCTAAGGACCTTGAGGAACAAAGGTGCTGCAAGAAGATAAGAGTAGAATCAGTGTCATTCATCAATAAAACCAACCTCTACAGTGATGAAGGTTCTGTTTCTAGTGCCAAAACAAGCTCTGATGATTGCAATGAACAAAATGTAGCATTTCCTGAAGTTGAAGCAAGAGTCTTGGAAAAAGAAGTACTCATCCGCATCCATTGCAAGAATCAAAATGGCTCTGTGCTCAAAATATTGACCCATCTTAGAACTCTAGATCTCTCCACAATAAGCAATAGTGCCTTACCATTTGGGAACTCTTTTCTTGACATTACCATTATTGCTCAGATGGGTGAAAAATACAAGCTAACCGTGAAGGAACTAGTGAAAAACTTGAGGCTAACTCTGTTGGGGTCACGTGACATAGACCACTGA 1044 0.3937 MEVPWQSFFSDMEMEEGNYFYDQCDKNSLDDHEFVLGKFIQQSGLSFESESFSPPNNGASCLSFEETTTISNNHVKLMSKSSSTNSIASHQHVPHKVFTASANATSPKSYVLSFDDSNVVAAVEATRELGNGRKHQANNRDQSKGDNQTSVRKSRNSSETLDHIMAERKRRQELTERFIALSATIPGLKKIDKASILSEAITYVKQLQKRAKDLEEQRCCKKIRVESVSFINKTNLYSDEGSVSSAKTSSDDCNEQNVAFPEVEARVLEKEVLIRIHCKNQNGSVLKILTHLRTLDLSTISNSALPFGNSFLDITIIAQMGEKYKLTVKELVKNLRLTLLGSRDIDH 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1191 347 Pfam Helix-loop-helix DNA-binding domain 163 208 IPR011598 GO:0046983
Lal10g1191 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 221 IPR036638 GO:0046983
Lal10g1191 347 Gene3D - 156 228 IPR036638 GO:0046983
Lal10g1191 347 MobiDBLite consensus disorder prediction 128 163 - -
Lal10g1191 347 Coils Coil 197 217 - -
Lal10g1191 347 PANTHER TRANSCRIPTION FACTOR NAI1 7 340 - -
Lal10g1191 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Lal10g1191 347 PANTHER BHLH TRANSCRIPTION FACTOR 7 340 - -
Lal10g1191 347 SMART finulus 164 213 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1191 Lal-Chr10 18389725 18392249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1191 98 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 37.052 2.81e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal10g1191 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1191 - - lang:109342243 575.859